Results for "GenBank"
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...ated to convert genetic information stored in GenBank entries to graphical maps. The input text file has to be in GenBank flat file format, whereas the...chondriome). Nevertheless, you can upload any GenBank entry. The workflow is devide...2809 days ago
- ...genomes and to explore conservation of synteny, in the context of the entire sequences and their annotation. It can read complete EMBL, GENBANK and GFF entries or sequences...
2787 days ago
Prokka: tool for the rapid annotation of prokaryotic genomes
...ter, and scales well to 32 core SMP systems. It produces GFF3, GBK and SQN files that are ready for editing in Sequin and ultimately submitted to Genbank/DDJB/ENA.2607 days ago
Genome Annotation Transfer Utility (GATU)
...t was designed for use with viral genomes, GATU can also be used to help annotate larger genomes (ie. bacterial genomes). The output is saved in GenBank, XML, or EMBL file format.2523 days ago
- ...gram that automates the creation of sequence records for submission to GenBank. It uses many of the same fun...enerally by data files. Tbl2asn generates .sqn files for submission to GenBank. Additional manual editing is...
2523 days ago
- ...of the tool include: Displaying the sequence and/or genes in a GenBank flat file. Highlighting...ioPerl and the input file formats that it supports, including: GenBank flat files, GFF, FASTA...
2496 days ago
funannotate: Eukaryotic Genome Annotation Pipeline
...able to accurately and easily annotate a genome for submission to NCBI GenBank. Existing tools (such as Maker) require significant manually editing to comply with GenBank submission rules, thus funann...2045 days ago
genoPlotR - plot gene and genome maps project!
...ntation of several segments of DNA Comparisons represented by areas between the segments (like Artemis, for example) Reads from common formats: Genbank, EMBL, blast, Mauve, and from...1961 days ago
MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization
...ly filter pair-end raw data (fastq files), assemble genome, search for mitogenome sequences from the genome assembly result, annotate mitogenome (genbank file as result), and mitogeno...1553 days ago
HS3D: Homo Sapiens Splice Sites Dataset
...ata set of Homo Sapiens Exon, Intron and Splice regions extracted from GenBank Rel.123. The aim of this data...oaches for gene identification and characterization. From the complete GenBank (Primate Sequences Division)...1413 days ago
