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3325 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
...module: Build by running Makefile.PL, remember the case sensitivity, make and make test.# perl Makefile.PLChecking if your kit is complete...Looks goodWriting Makefile for XML::Pars...3912 days ago
Five unique traits of effective computational biologist
...s of their profession are not only good programmer but also expert in...stuff. Moreover, In order to be a good and effective biological prog...’s absolutely necessary. The good biological programmers learn...ing your work. There are some very good “it’s just a job&...3912 days ago
Online Courses for biology beginners
Most of the time we face some biological problems while analysing our data computationally. This bookmark is being created to provide list of all free online courses at one place. If you know any other good online cource resources to learn biology please let me know.3906 days ago
Illuminating next generation sequencing data with Go
Another good lecture for Illumina sequencing data analysis from Dan Kortschak, Bioinformatics Group, School of Molecular and Biomedical Science ,The University of Adelaide3870 days ago
Regular Expression Cheat Sheet
...Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic string data. We did not find any good and user friendly regular exp...3915 days ago
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3880 days ago
Bio++ : C Language libraries for your biological need
...vely requires a major mind-shift for many C programmers)Are you really interested in C/C++ language for the biological programming? If yes there is good news for you. Bio++ 1.9.0 is...3910 days ago
List of pharmacogenomics companies in India
pharmacogenomics companies in India are making their good impacts. Here is the list of few pharmacogenomics companies. Please add more if not mentioned here. Genomics in India www.g...3884 days ago
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Research with help of bioinformatics helpful
Endocrinologist G.R. Sridhar says Research with the help of bioinformatics with a trans-disciplinary approach is yielding good results. http://www.thehindu.com/features/education/research/research-with-help-of-bioinformatics-helpful/article2295629.ece3891 days ago
3883 days ago
Bioinformatics PhD studentship available in New Zealand
...ss scientific networks. To apply for the post, please send a cover letter stating your interest in the position and why you think you would be a good candidate, a Curriculum Vitae...3910 days ago
3910 days ago
Golden Rules of Bioinformatics
.... :P Stastics is a systematic method of comming to the wrong conclusion with confidence. Bug is a undocumented feature in programming languages. Good biological programmer goes on...3878 days ago
TEDxCopenhagen - Morten Sommer - What Bacteria Means for the Good Life
Scientist and entrepreneur Morten Sommer will talk about how bacteria and microbes form an integral part of the human body and play a significant role in controlling h...3515 days ago
Genetic Algorithms demonstration with word DNA in Perl
...l -w # GA demonstration with word DNA (512 bits) use strict; use Data::Dumper; # individuals in the population my $popsize = 1024; # a good starting point my $dna_lengt...2334 days ago
Create genome scaffolding with Perl
...} } my $preTrim = min($sStart, $lStart); my $postTrim = min($sLen - $sEnd, $lLen - $lEnd); ## Only continue on if there's a good likelihood that this will wor...2270 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3488 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...searcher in the field of bioinformatics (from any branch) must always be good about the environmental contr...this, even if the tools pass the benchmarking, researchers should have a good biological background in thei...2324 days ago
Bioinformatics Skill Development Program (BSDP)
...nd scientific approaches to research, the computational biology skill become an even greater asset. It also comes into the light that students with good programming knowledge lack bi...3669 days ago
Tags: Ruby, Criticism, Bad, Good, Opinion
3880 days ago
LSC :a long read error correction tool
Getting Started These simple steps will help you integrate LSC into your transcriptomics analysis pipeline. Read the LSC_requirements for running LSC. Download and set-up the LSC package. Follow the tutorial to see how LSC works on some example data. Read the ...Tags: LSC, long, read, error, correction, tool, fast, correction, sensitivity, good, accuracy
2065 days ago
Comment on "Sibelia: A comparative genomics tool"
...hat occur in the genome, and simplifies it by removing special type of undirected cycles called "bulges", see [1] for more details. Graph is a good model for describing the algo...1247 days ago
Comment on "KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies"
...files. Then download the output files to you computer using scp and look at the png file that was produced. Does the kmer content look good to you? How much of the kmer...1299 days ago