Results for "HTSlib"
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...and calling/filtering/summarising SNP and short indel sequence variantsHTSlibA C library for reading/writing high-throughput sequencing data Samtools and BCFtools both use HTSlib internally, but these source...2593 days ago
TARDIS: Toolkit for automated and rapid discovery of structural variants
...apid DIscovery of Structural variants Requirements zlib (http://www.zlib.net)mrfast (https://github.com/BilkentCompGen/mrfast)htslib (included as submodule; http://htslib.org/)Fetching tardis git clo...2507 days ago
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Awesome perl frameworks, libraries and software - PART 3
...gle provides OO access to Google REST API from Perl Ensembl/Bio-DB-HTS - Git repo for Bio::DB::HTS module on CPAN, providing Perl links into HTSlib eblah/E-Blah-Forum - E-...2479 days ago
Top-level pages
List of Bioinformatics Software Tools for Next Generation Sequencing
...es visualization DeNovoGear Description: de-novo variant calling and interpretation; standalone program; dependencies C++ compiler, CMake, HTSlib, Eigen, Boost Input: PED and...2894 days ago
List of visualization tools for genome alignments
...tudies http://sing.ei.uvigo.es/pileline/pilelinegui.html SAMtools tview Simple and fast text alignment viewer; NGS compatible http://www.htslib.org/ SEWAL Uses a locality-...2269 days ago
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Bio-Scripts
Installing pb-assembly on Linux !
....0.2-gompi-2016b-OpenBLAS-0.2.18-LAPACK-3.6.1 HTSlib/1.3.1-foss-2016a...1.10.2-hc401514_2 conda-forge htslib: 1.7-0....10.2 hc401514_2 conda-forge htslib 1.7...2019 days ago
- ...t https://github.com/samtools/htslib/releases/download/1.9/htslib-1.9.tar.bz2 --2018-10-25 13:...on=attachment%3B%20filename%3Dhtslib-1.9.tar.bz2&response-content-...tslib-1.9/cram/cram_encode.c htslib-1.9/cram/cram_encode.h htsli...ib-1.9/test/bgziptest.txt.gz htslib-1.9/test/bgziptest.txt.gz.gzi...
2004 days ago
- +5 more Bio-Scripts
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- Samtools is a suite of programs for interacting with high-throughput sequencing data. It consists of three separate repositories: SamtoolsReading/writing/editing/indexing/viewing SAM/BAM/CRAM formatBCFtoolsReading/writing BCF2/VCF/gVCF files and calling/filtering/summarising SNP and short indel ...
Tags: Bioinformatics, HTSlib, NGS, Samtools, C, Lib
2593 days ago
