Results for "Insertions"

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  • The Mills lab

    ...detects SVs by evaluating gapped sequence alignments; and (iv) sequence assembly, which enables the discovery of novel (non-reference) sequence insertions. http://millslab.org/resea...

    2945 days ago

Bio-Scripts

  • Update zsh on Ubuntu !

    ...chiamiov.zsh-theme | 2 +- tools/theme_chooser.sh | 2 +- 140 files changed, 1710 insertions(+), 703 deletions(-) create...

    2027 days ago

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  • Structural variation: the hidden genomic treasure

    Genome re-sequencing projects have revealed substantial amounts of genetic variation between individuals extending beyond single nucleotide polymorphisms (SNPs) and short indels. Structural Variations (SVs) and Copy Number Variations (CNVs) are a major source of genomic variation. However, compar...

    Tags: Bioinformatics, Chromosome, Genome, NGS, Structure Variation, Deletions, Insertions, Duplications, Inversions, Translocations

    2655 days ago

  • McClintock: Meta-pipeline to identify transposable element insertions using next generation sequencing data

    an integrated bioinformatics pipeline for the detection of TE insertions in whole-genome shotgun data, called McClintock (https://github.com/bergmanlab/mcclintock), which automatically runs and standardizes output for multiple TE detection methods. We demonstrate the utility of McClintock by eval...

    Tags: McClintock, Meta-pipeline, identify, transposable, element, insertions, next, generation, sequencing, data

    1239 days ago