Results for "Install"

Bio-Scripts

  • Install grabseqs with conda !

    (JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1180 days ago

  • Install Perl Locally !

    ...e your system admins have already installed these essentials: # Debian...admins should run: sudo apt-get install -y build-essential libexpat1-...admins should run: sudo yum groupinstall -y 'Development Tools' sudo...perl-5.24.1/lib/perl5 make make install # Install dependencies for...

    2107 days ago

  • Install NCBI entrez-direct and esearch using conda !

    $ conda install -c bioconda entrez-direct Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda e...

    1064 days ago

  • Download genome using NCBI esearch command line !

    ...t fasta > seq1.fa esearch -db nucleotide -query "CP003784.1" | efetch -format fasta > seq2.fa #fastANI for alignment free comparision #conda install -c bioconda fastani fastAN...

    1064 days ago

  • Install CANU with conda !

    vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda/label/cf201901 canu Collecting package metadata (current_repodata.json): done Solving environment:...

    1017 days ago

  • Install Shasta using conda !

    vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda shasta Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1017 days ago

  • Install CVSTK using codna !

    vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda csvtk Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1017 days ago

  • Install seqkit using conda !

    vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda seqkit Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1017 days ago

  • Install Minimap2 using conda !

    vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda minimap2 Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1017 days ago

  • Install seqtk using conda !

    vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda/label/cf201901 seqtk Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1017 days ago