Results for "Ion"
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About me: ...omain of bioinformatics and computational biology, I mainly focus on...somal breakpoint and amniotes evolution. I (We) develop certain compu...to answer specific biological questions pertaining to these domains....@ http://scholar.google.co.uk/citations?user=ySm4BzcAAAAJ&hl=en...Interests: Computational BiologyInterests: Evolutionary BiologyInterests: AdaptationInterests: SelectionInterests: Molecular Evolution68 days ago
- About me: I am a computational biologist and currently working on system biology.Skills: Computational Biology
3907 days ago
- +62 more Users
Bookmarks
- ...MIRA assembles/maps reads gained by electrophoresis sequencing (aka Sanger sequencing) 454 pyro-sequencing (GS20, FLX or Titanium) Ion Torrent Solexa (Illumina...
2941 days ago
MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
...rce program for mapping second and third-generation sequencing reads to a referen...Illumina, Applied Biosystems SOLiD, Roche 454, Ion Torrent and Pacific BioScienc...ed to capture mismatches as well as short insertions and deletions. To support th...2896 days ago
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Genome Assembly Tools and Software - PART2 !!
...ng comparative genome information and paired-end reads. DISCOV...2.6.1 – A LASSO Regression Approach to RNA-Seq Based Tra...d-Read Iterative Contig Extension) is a de novo genome assemble...s an assembler of next generation sequence. Curtain is a Java w...2675 days ago
Top-level pages
Structure of Binary files used for storing sequencing data-bam and sff
...nary files is that they occupy less space in memory with maximum information content. Link for those who...://samtools.sourceforge.net/SAMv1.pdf (from page 12) sff file (for Ion torrent and 454 files): http...3909 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...eq, Genome Browser, visualizations, Biological Interpretation, etc. Supports workflows &ldq...ws for all common NGS applications (RNA-Seq, ChIP-Seq, DNA-Seq,...: command-line program, detection of rare SNVs, relies upon Sam...ag) MultiBLUP Description: Package program, command lin...2898 days ago
Wire posts
Bio-Scripts
Commands to install conda in Ubuntu !
...se BSD License: Redistribution and use in source and binary...OFITS; OR BU SINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY TH...n s them. If needed, instructions for removing the cuDNN binar...... installing: sortedcollections-1.1.2-py37_0 ... installing...1501 days ago
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Comments
- ...mulate reads with different sequencing technologies, including Illumina, Ion Torrent, and PacBio. PIRS all...can also simulate different types of sequencing errors, such as substitution, insertion, and deletion erro...
405 days ago
- ...R package which provides functions for plotting and analyzing the duplication rates dependent on the expres...run as a stand-alone application or it can be integrated into...y control (QC) of next generation sequencing (NGS) data. The to...control pipelines, and an optional HTML quality report. S4 Seq...
2127 days ago
