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  • Basic Structure of Snakemake Pipeline Run !

    /user/snakemake-demo$ ls config.json data envs scripts slurm-240702.out Snakefile...cripts called by the snakemake formula. config.json = json format file with extra...ameters for our snakemake file to use. cluster.json = json format file with speci...

    919 days ago

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  • Create a conda environment !

    JitMeta (base) ➜ JitMeta conda create --name JitMetaENV Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1202 days ago

  • Install grabseqs with conda !

    (JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1202 days ago

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  • JSON

    JSON (JavaScript Object Notation) is a lightweight data-interchange format. It is easy for humans to read and write. It is easy for machines to parse and generate. It is based on a subset of the JavaScript Programming Language, Standard ECMA-262 3rd Edition - December 1999. JSON is...

    Tags: Bioinformatics, Analysis, Format, JSON

    2573 days ago

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