Results for "Lab"
Top-level pages
Tools for Searching Repeats And Palindromic Sequences
...here are many on-line services providing the EMBOSS tools, for example: Wageningen Bioinformatics Webportal EMBOSS explorer Mobyle@Pasteur Soaplab2 Web Services at Vital-IT...2195 days ago
Genome Assembly Tools and Software - PART1 !!
...SWAP-Assembler 2 – A scalable and fully parallelized Geno...ta. We present SWAP-Assembler, a scalable and fully parallelized geno...SAT-Assembler 20160120 – Scalable and Accurate Targeted Gene...FinisherSC is a repeat-aware and scalable tool for upgrading de-novo...2669 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...ts) Software (C++) https://pachterlab.github.io/kallisto/ Sailfish...(uses k-mers) https://combine-lab.github.io/salmon/ RNA-Skim...ken/ LMAT Assignment of taxonomic labels to reads by k-mers se...ftware (Java) https://github.com/ctlab/metafast...2355 days ago
Single Cell RNAseq data analysis tutorial !!
...or SCell: single-cell RNA-seq analysis software https://github.com/diazlab/SCell Beta-Poisson model for...ttp://www.cell.com/developmental-cell/fulltext/S1534-5807(16)30682-7 Scalable latent-factor models applie...2334 days ago
Tools for bacterial whole genome annotation
...ral internal databases and is not currently available for download or use outside...any genes with unknown functions. BEACON is available under GNU General Public Li...ithout the overhead of a database. MAKER is available for download and can be tes...2315 days ago
Computational resources for TE discovery and TE detection
...fe.fudan.edu.cn/ltr_finder/ LTR_STRUC http://www.genetics.uga.edu/retrolab/data/LTR_Struc.html LTR_MIN...eatMasker http://www.repeatmasker.org/ RepeatRunner http://www.yandell-lab.org/repeat_runner/index.html...2258 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
...r to joining Strand NGS team, Suman has worked extensively on protein synthesis in eubacteria and has experience working in CAP and NABL accredited lab validating and interpreting N...2248 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
Horizontal gene transfer (HGT), the “non-sexual movement of genetic material between two organisms” , is relatively common in prokaryotes and single-...834 days ago
Protein-Protein Interaction Sites Predictions !
The study of Protein–Protein Interactions (PPIs) has a crucial role in biology, medicine and the pharmaceutical industry. PPIs can be investigated from two aspe...2186 days ago
Gap filling or Contigs extensions tools !
...ery good software, it is useful only in some specific situations. Take a look at the PRICE software from the DeRisi lab. Its meant to do something very similar. http://derisilab.ucsf.edu/index.php?page=softw...2149 days ago
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