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• • Shreya Ganguli@shreya

  

  VI(Visual) Editor Reference manual http://glaciated.org/vi/ #Linux #Vi #Editor #Commands

  3862 days ago

• • Rahul Nayak@rahul

  

  Linux onliner for bioinformatician https://github.com/stephenturner/oneliners #Linux #Onliner

  3651 days ago

• • Alok Prajapati@Alok

  

  Linux for bioinformatics http://rous.mit.edu/index.php/Unix_commands_applied_to_bioinformatics #Linux #Bioinformatics #Commands

  3652 days ago

• • Rahul Nayak@rahul

  

  rename all *.txt as *.bak: find . -name "*.txt" | sed "s/\.txt$//" | xargs -i echo mv {}.txt {}.bak | sh #Linux #Rename #Oneliner

  3610 days ago

• • Jit@jit.aber

  

  Count the number of "pattern" occurrence in a file grep -o 'pattern' anc.annots.gff | wc -l #Linux #grep #Count #Number #Occurrence

  3604 days ago

• • Abhimanyu Singh@abhimanyu

  

  Linux one-liner. https://wikis.utexas.edu/display/bioiteam/Scott%27s+list+of+linux+one-liners #Linux #Oneliner #NGS

  3573 days ago

• • Jit@jit.aber

  

  To count number of fasta entries, I use: grep -c '^>' mySequences.fasta #Perl #Count #Number #Fasta #Linux #Grep

  3564 days ago

• • Jit@jit.aber

  

  The syntax to remove last character from line or word is as follows: x="foo bar" echo "${x%?}" #Remove #Last #Bash #Linux

  3540 days ago

• • Jitendra Narayan@admin

  

  replace a word in all files in a directory: grep -lr --exclude-dir=".git" -e "oldword" . | xargs sed -i "s/oldword/newword/g" #Replace #Word #Linux

  3520 days ago

• • Rahul Nayak@rahul

  

  Print the PYTHONPATH python -c "import sys; print sys.path" #Pythonpath #Linux

  3448 days ago

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