Results for "Linux"

Wire posts

  • Split the file in Linux with size. $ split --bytes=50M aaaa.fa #split #linux #size

    2458 days ago

  • To know the size of the directory in current folder. $ du -sh * #Size #Directory #List #Space #Linux #du

    2463 days ago

  • You can use the df command to know the free space in the disk: $ df -h . #df #Linux #List #Free #Space

    2463 days ago

  • Linux command to find the file contains a string "LOCK_EX": grep -Ril "LOCK_EX" / #Root #Find #Linux #Grep #search

    2311 days ago

  • Remove the unwanted characters from Fasta file: sed -e '/^[^>]/s/[^ATGCatgc]/N/g' infile.fa #sed #unwanted #illegal #remove #correct #fasta #linux

    2307 days ago

  • Important #NGS tutorial http://userweb.eng.gla.ac.uk/umer.ijaz/bioinformatics/linux.html

    2243 days ago

  • Glob multiple files in Linux with Perl. my @soundfiles = grep {/\.(wav|mid|mp3|rm|ogg)$/i} glob("*"); #Perl #Linux #Glob

    2190 days ago

  • To upgrade the perl in Linux $ sudo cpan; cpan[1]> upgrade #Perl #Upgrade #Linux #Ubuntu

    2113 days ago

  • Sed illegal charters from fasta. $ sed '/^[^>]/ s/[^AGTC]/N/gi' < seq.fa #fasta #otherthanATGC #replace #sed #Linux #illegal

    2106 days ago

  • Get unique ids from column 1 in Linux. $ cat output_file | cut -f 1 | sort | uniq > allUniqOUT #Unique #Linux #Cut

    2101 days ago