Results for "Linux"
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Comment on "Short-read assembly using Spades !"
...-read assembly: Install SPAdes: SPAdes can be downloaded from the official website (http://cab.spbu.ru/software/spades/). It is available for Linux, macOS, and Windows operating...405 days ago
Comment on "ncbi-datasets-cli -- Quickstart: command line tools !"
...datasets 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/command-line/LATEST/linux-amd64/datasets' % Total % Rec...taformat 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/command-line/LATEST/linux-amd64/dataformat' % Total % R...864 days ago
Comment on "Download desire version of Blast software !"
Blast v2.12 wget https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ncbi-blast-2.12.0+-x64-linux.tar.gz926 days ago
- ... bioconda/noarch::asciigenome-1.15.0-0 openjdk pkgs/main/linux-64::openjdk-8.0.152-h7b6447c_...
1504 days ago
Comment on "NGMLR: long-read mapper designed to align PacBio or Oxford Nanopore"
...leases/download/v0.2.7/ngmlr-0.2.7-linux-x86_64.tar.gz--2020-02-03 11:...leases/download/v0.2.7/ngmlr-0.2.7-linux-x86_64.tar.gzResolving github...chment%3B%20filename%3Dngmlr-0.2.7-linux-x86_64.tar.gz&response-co...chment%3B%20filename%3Dngmlr-0.2.7-linux-x86_64.tar.gz&response-co...1537 days ago
Comment on "How to set up SSH on Ubuntu 18.04"
The SSH server is not installed by default on Ubuntu desktop systems but it can be easily installed from the standard Ubuntu repositories. To install and enable SSH o...1540 days ago
Comment on "Perl one-liner for bioinformatician !!!"
This tutorial is useful https://blogs.oracle.com/linux/the-top-10-tricks-of-perl-one-liners-v21939 days ago
Comment on "Installing Perl environment on Linux"
...perl5 /home/urbe/anaconda3/envs/myLocalPerl/lib/site_perl/5.26.2/x86_64-linux-thread-multi /home/urbe/anaco...ite_perl/5.26.2 /home/urbe/anaconda3/envs/myLocalPerl/lib/5.26.2/x86_64-linux-thread-multi /home/urbe/anaco...2110 days ago
Comment on "poRe: an R package for the visualization and analysis of nanopore sequencing data"
...sp;and we are using version 0.16 Once downloaded, and back at the Linux command line: R CMD INSTAL...t that: wget http://spades.bioinf.spbau.ru/release3.6.2/SPAdes-3.6.2-Linux.tar.gz gunzip < SPAdes-3....2158 days ago
Comment on "SPAdes hybrid genome assembly"
...read correction. This takes up lots of RAM, so we are going to skip it. We will also only use 3 kmers to save time: ./SPAdes-3.6.2-Linux/bin/spades.py --only-assemble...2158 days ago
