Results for "Linux"

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  • VI(Visual) Editor Reference manual http://glaciated.org/vi/ #Linux #Vi #Editor #Commands

    Tags: Linux, Vi, Editor, Commands

    1521 days ago

  • rename all *.txt as *.bak: find . -name "*.txt" | sed "s/\.txt$//" | xargs -i echo mv {}.txt {}.bak | sh #Linux #Rename #Oneliner

    Tags: Linux, Rename, Oneliner

    1269 days ago

  • Linux onliner for bioinformatician https://github.com/stephenturner/oneliners #Linux #Onliner

    Tags: Linux, Onliner

    1310 days ago

  • Linux for bioinformatics http://rous.mit.edu/index.php/Unix_commands_applied_to_bioinformatics #Linux #Bioinformatics #Commands

    Tags: Linux, Bioinformatics, Commands

    1310 days ago

  • Count the number of "pattern" occurrence in a file grep -o 'pattern' anc.annots.gff | wc -l #Linux #grep #Count #Number #Occurrence

    Tags: Linux, grep, Count, Number, Occurrence

    1263 days ago

  • Linux one-liner. https://wikis.utexas.edu/display/bioiteam/Scott%27s+list+of+linux+one-liners #Linux #Oneliner #NGS

    Tags: Linux, Oneliner, NGS

    1232 days ago

  • To count number of fasta entries, I use: grep -c '^>' mySequences.fasta #Perl #Count #Number #Fasta #Linux #Grep

    Tags: Perl, Count, Number, Fasta, Linux, Grep

    1223 days ago

  • The syntax to remove last character from line or word is as follows: x="foo bar" echo "${x%?}" #Remove #Last #Bash #Linux

    Tags: Remove, Last, Bash, Linux

    1198 days ago

  • replace a word in all files in a directory: grep -lr --exclude-dir=".git" -e "oldword" . | xargs sed -i "s/oldword/newword/g" #Replace #Word #Linux

    Tags: Replace, Word, Linux

    1179 days ago

  • Print the PYTHONPATH python -c "import sys; print sys.path" #Pythonpath #Linux

    Tags: Pythonpath, Linux

    1106 days ago