Results for "Lists"
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Fancy Oneliner for Bioinformatics !!
This webpage lists some of the one-liners that we frequently use in metagenomic analyses. You can click on the following links to browse through different topics. You can cop...2849 days ago
Pacbio Long Reads Compatible Software and Tools
...to be open source or freely available for non-commercial use. See the individual project sites for up-to-date license information. A separate page lists commercial software. Kn...2598 days ago
- ...s. To begin, input your data using one of the three input styles. "File" takes a correctly formatted.csv file. "List" takes up to 6 different lists that contain unique elements,...
2568 days ago
SIMA C++ Implementation: Simultaneous Multiple Alignment of LC/MS Peak Lists
...implementation for SIMA - Simultaneous Multiple Alignment of LC/MS Peak Lists. The package contains C++ sou...A. Hamprecht (2011). SIMA: Simultaneous Muliple Alignment of LC/MS Peak Lists, Bioinformatics 27(7):987-993...2344 days ago
REVIGO: Reduced Visualize gene ontology
REViGO can take long lists of Gene Ontology terms and summarize them by removing redundant GO terms. The remaining terms can be visualized in semantic similarity-based scatterplo...2095 days ago
KEGG Mapper – Reconstruct Pathway
...PATHWAY mapping tool that assists genome and metagenome annotations. The input data is a single gene list (for a single organism) or multiple gene lists (for multiple organisms) anno...1961 days ago
GeneOverlap: An R package to test and visualize gene overlaps
Overlapping gene lists can reveal biological meanings and may lead to novel hypotheses. For examp...iation. Similary, we can perform such kind of overlapping between the gene lists of different histone modifica...1945 days ago
MAGIC: A tool for predicting transcription factors and cofactors driving gene sets using ENCODE data
...Controllers (MAGIC), uses ENCODE ChIP-seq data to look for statistical enrichment of TFs and cofactors in gene bodies and flanking regions in gene lists without an a priori ...1246 days ago
