Results for "MAF"

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  • MafFilter: a highly flexible and extensible multiple genome alignment files processor http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3904536/ #MultipleGenomeAlignment #MAF #Genome #Alignment

    Tags: MultipleGenomeAlignment, MAF, Genome, Alignment

    1137 days ago

  • mafTools

    Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.

    Tags: Bioinformatics, MAF, mafTools, Alignment, Multiple

    488 days ago

  • Convert MAF file format http://last.cbrc.jp/doc/maf-convert.html #MAF #Convert #Format

    Tags: MAF, Convert, Format

    135 days ago

  • MAF2Synteny https://github.com/fenderglass/maf2synteny #Convert #Synteny #MAF #Ragout

    Tags: Convert, Synteny, MAF, Ragout

    135 days ago

  • maf2synteny

    A tool for converting for recovering synteny blocks from multiple alignment (in MAF fromat) This tool is a standalone version of Ragout module [http://fenderglass.github./Ragout]

    Tags: Tool, Conversion, Recover, Synteny, Blocks, Multiple, Alignment, MAF, Format, maf2synteny

    127 days ago

  • mafTools

    mafTools is a collection of tools that operate on Multiple Alignment Format (maf) files. mafComparator A program to compare two maf files by sampling. Useful when testing predicted alignments against known true alignments. mafCoverage A program to calculate the amount of alignm...

    Tags: mafTools, MAF, Format, Alignment

    9 days ago

  • MafTools

    maftools - An R package to summarize, analyze and visualize MAF files. Introduction. With advances in Cancer Genomics, Mutation Annotation Format (MAF) is being widley accepted and used to store variants detected. The Cancer Genome Atlas Project has seqenced over 30 different cancers with sample...

    Tags: Bioinformatics, Maf, Tools, MafTools, Paint, Plot, Read

    218 days ago