Results for "MD"
Users
Skills: MD simulations3809 days ago
- Skills: ChemDraw
2105 days ago
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Blogs
Five unique traits of effective computational biologist
...n answer, yet I solved the issues and moved on. I’m not a magician — I just know how to find a...best, it is a fact. You must be passionate about more than programming — you must also be excited...3935 days ago
- ...I am Lalit, Working as SRF In Haffkine Institute. I would like to publish research article related to protein modeling and docking which in cludes MD as final step. I am currentl...
3388 days ago
- +15 more Blogs
Bookmarks
- ...state-of-the-art molecular profiling to create diagnostic, prognostic, and therapeutic strategies precisely tailored to each patient's requirements — hence the term “Pre...
3892 days ago
RNA Sequencing Helps Identify Functional Variants from GWAS
...associated journals, advances in high-throughput RNA sequencing are providing new tools for understanding how disease loci influence gene expression—a starting point for under...3801 days ago
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Files
- ...e... 161.35 sec[bwa_aln_core] write to the disk... 0.06 sec[bwa_aln_core] 70989574 sequences have been processed.[main] Version: 0.7.15-r1140[main] CMD: bwa aln -t 30 all_p_ctg.fa -...
2136 days ago
- SPAdes—St. Petersburg genome Assembler—was originally developed for de novo assembly of genome sequencing data produced for cultivated microbial isolates and for single-cell ge...
809 days ago
Pages
Bio++ : C Language libraries for your biological need
...mand lineetc. Some of the libraries are under development that will be updated by Bio++ developers on there websites.C/C++ Tutorialhttp://www.cbcb.umd.edu/~jeallen/bioinfo/Tutorial...3932 days ago
- ...t you use single-quotes to quote the code for -e. This usually means you can't use single-quotes within the one liner code. If you're using Windows cmd.exe or PowerShell, you must u...
3254 days ago
- +4 more Pages
Top-level pages
- ...an atomic scale, and motions have to be simulated by molecular dynamics (MD) simulations. Also free energ...en binding energies of different protein ligands) can be characterized by MD simulations. Molecular mechan...
3932 days ago
- ...//www.maths.mu.oz.au/~moshe/dp/bibl/bibliography.html•http://cartan.gmd.de/PAPER/ismb95/ismb_html.htm...ttp://www.cse.ucsc.edu/research/compbio/ Hmms •http://www.medmicro.mds.qmw.ac.uk/HMMER/main.html&bu...
3931 days ago
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Wire posts
News
- ...ons questions and raise objections to in science. It even suggesting a fourth domain of life. The new visrus are about one micron—a thousandth of a millimeter—in length, the newfound ge...
3875 days ago
- ...clusters per run). Using state-of-the art optics and faster chemistry, HiSeq X Ten can process sequencing flow cells more quickly than ever before — generating a 10x increase...
3747 days ago
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Opportunity posts
"Advances in Molecular Dynamics of Biomolecules" December 3-4, 2013 @ JNU
...n the large scale simulations at the molecular level. Molecular Dynamics (MD) simulations have been an inv...this conference is two-fold: Understanding different algorithms of MD and their relevant applicatio...3862 days ago
Associate Professor - Centre for Bioinformatics at Maharshi Dayanand University, Rohtak
...isement. Send your application to the A.R (Estt.Teaching), M.D.University, Rohtak on or before December 23, 2013. For more details: http://www.mdurohtak.ac.in/pdf/Notices_Pdf/...3781 days ago
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ResearchLabs posts
- ...hods Setup of a kinetic Monte Carlo (KMC) scheme to study the flux of antibiotics through porins and efflux systems Setup of protocol to integrate MD results in a ligand-based app...
3854 days ago
- ...ests in each of these areas are outlined briefly below, and a full list of publications is available via PubMed. http://www.ncbi.nlm.nih.gov/pubmed?cmd=search&term=shendure Mor...
3846 days ago
- +2 more ResearchLabs posts
Video
The human microbiome and what we do to it
Did you know that you and I are only 1% human — we've 90 trillion cells whi...of what you and I are made of is actually human — and we need our non-human...bits to survive. This part of us now has a name — it's called our microbiom...3840 days ago
Bio-Scripts
Blast script to index and extract sequence !!
...ut EC -in EC4115.fa -parse_seqids # retreive an entry by id $ blastdbcmd -db EC -entry 'NC_011353.1' |...AGAC .... # query the blast database by id and coordinates $ blastdbcmd -db EC -range 100-105 -entry...2837 days ago
Perl script to find palindromic regions in DNA sequences
use strict; use warnings; my $pp = qr/(?: (\w) (?1) \g{-1} | \w? )/ix; my $filename = $ARGV[0]; open(my $fh, '2139 days ago
- +46 more Bio-Scripts
Groups
...for this include: mz-Mine XCMS (R code script), and Metalign Metabolomics databases for searching the potential candidates biomarkers: - hmdb-http://www.hmdb.ca- metlin -http://metlin.sc...3690 days ago
Tags
- Dear All, I am Lalit, Working as SRF In Haffkine Institute. I would like to publish research article related to protein modeling and docking which in cludes MD as final step. I am currently working on protein modeling and docking area. Those who are interested . Kindly contact me on this...
Tags: docking, protein modeling, in silico, MD
3388 days ago
Comments
Comment on "ncbi-datasets-cli -- Quickstart: command line tools !"
...ets 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/command-line/LATEST/linux-amd64/datasets' % Total % Receive...mat 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/command-line/LATEST/linux-amd64/dataformat' % Total % Recei...865 days ago
Comment on "Estimate Genome Size with Jellyfish and R"
Jellyfish manual at http://www.genome.umd.edu/docs/JellyfishUserGuide.pdf966 days ago
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