3902 days ago
List of motif discovery tools !
...rediction Conduct in silico sumoylation sites prediction. SWAKK -- a web server for detecting positive selection in proteins using a sliding window substitution rate analysis D...1956 days ago
Next Generation Sequencing (NGS) Tutorials
...netic-inference.co.uk/blog/2009/04/basics-sequencing-dna-part-1/ http://www.genetic-inference.co.uk/blog/2009/08/basics-sequencing-dna-part-2/ A window into third-generation sequenc...3450 days ago
Trimmomatic: A flexible read trimming tool for Illumina NGS data
...ed.fq.gz ILLUMINACLIP:TruSeq3-PE.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 This will per...below quality 3) (TRAILING:3) Scan the read with a 4-base wide sliding window, cutting when the average qua...2905 days ago
Keep Your Important SSH Session Running when You Disconnect from Server !!!
...mp; exit), but following are the ones I use the most. Screen is like a window manager for your console. It...session, or create a new one if none existsscreen -D -rTo create a new window inside of a running screen se...3666 days ago
Frequent words problem solution by Perl
...my $name (keys %myHash){ print "$name " if $myHash{$name} == $max;}sub kmerMatch { #Check the exact matching kmers with sliding windowmy ($string, $myStr, $kmer)=@_...3215 days ago
Apps for Busy Bioinformatics Researchers !!!
...chosen organisms, such as species, compute summary statistics, and present the results. Names of two taxa to be compared are entered in the search window and the results are presented...3504 days ago
Awesome perl frameworks, libraries and software - PART 1
... - online perl testing! tsee/ZeroMQ-Perl - Perl interface to 0MQ2 trizen/obmenu-generator - A fast menu generator for the Openbox Window Manager. rjbs/App-Cmd -...2452 days ago
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Install BLAST in Ubuntu/Linux and Window !
#On ubuntu sudo apt-get install ncbi-blast+ #Ubuntu Conda installation conda install -c bioconda blast #Windows installation First: Download ftp://ftp.ncbi.nlm.nih.gov/blas...1109 days ago
Perl program to implement sliding window !
#!/usr/bin/perl -w my $filename = 'data.txt'; open(my TR, '2877 days ago
Comment on "Far Manager Commands and Links !"
...nting files F6- here you can create a link (shortcut) to a file or folder F7- file search F8- display command history F9- resizing the program window F10- folder search F11- dis...903 days ago
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