Public Databases for Bioinformatics !
...Path/hg38/bigZips/hg38.fa.gz. For use case 2 we used the set of narrowPeak files summarized in https://github.com/wkopp/janggu_usecases/tree/master/extra/urls.txt (archived...1127 days ago
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InfoGenomeR: Integrative reconstruction of cancer genome karyotypes
InfoGenomeR is the Integrative Framework for Genome Reconstruction that uses a breakpoint graph to model the connectivity among genomic segments at the genome-wide scal...1084 days ago
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TMAP - torrent mapping alignment program General Notes
...git clone git://github.com/iontorrent/TMAP.git cd TMAP git submodule init git submodule update https://github.com/iontorrent/TS/tree/master/Analysis/TMAP...2578 days ago
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miniasm: very fast OLC-based de novo assembler for noisy long reads
Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outpu...2339 days ago