Results for "Metagenome"


  • Jitbiotech

    About me: I am working on Phylogenetic and functional diversity of forest soil metagenome using Next Generation Sequencing.

    909 days ago




  • Genome Assembly Tools and Software - PART2 !!

    ...earningMetaVelvet is an extension of Velvet assembler to de novo metagenome assembly from short sequence...) is a sequencing approach and assembly software for profiling T-cell metagenomes using short reads from the m...

    425 days ago

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  • VirMet

    Watch out: only a few files are counted in coverage statistics. Full documentation on Read the Docs. A set of tools for viral metagenomics. virmet is called with a command subcommand syntax: virmet fetch --viral n, for example, downloads the bacterial database. Other available subcom...

    Tags: Bioinformatics, Analysis, NGS, VirMet, Genome, MetaGenome

    503 days ago


    Metagenomics sequencing projects collect samples of DNA from uncharacterized environments that may contain hundreds or even thousands of species. One of the main challenges in analyzing a metagenome is phylogenetic classification of raw sequence reads into groups representing the same or similar ...

    Tags: Bioinformatics, Analysis, NGS, PHYMMBL, Genome, MetaGenome, Classification, Reads

    503 days ago

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  • Comment on "Platanus"

    ...s on k-mer occurrence distribution. If k-mer occurrence distribution is abnormal (Ex. contaminated, transcriptome, metagenome, and so on), the value should...

    538 days ago