Download mutliple fasta file from NCBI in one GO!!
if you have less time, then use three ways mentioned in bookmark link to extract/download all fasta sequences in single click given that you already have a list of GIs or accession IDs . Alternatively, use one liner perl script: perl -ne 'if(/^>(\S+)/){$c=$i{$1}}$c?print:chomp;$i{$_}=1 if @A...Tags: fasta, multiple fasta, ncbi, entrez, perl
3900 days ago
Tags: Details, annotation, genes, gene_info, function, ncbi, detail
1931 days ago
Tags: extract, taxdump, readme, taxonomy, ncbi
1538 days ago
Tags: download, database, ncbi, ftp, genome, dna, reads, genome, assembly, files, ucsc
1534 days ago
ncbi-datasets-cli -- Quickstart: command line tools !
Install and use the NCBI Datasets command line tools The NCBI Datasets datasets command line tools are datasets and dataformat . Use datasets to download biological sequence data across all domains of life from NCBI. Use dataformat to convert metadata fr...Tags: ncbi-datasets-cli, database, download, ncbi, genome, genes, datasets
870 days ago
Tags: PSI Blast, BLAST, NCBI, Alignment, Search, Sequence
3898 days ago
Tags: PubMed, Research, NCBI
3836 days ago
Conserved Domain Database (CDD) version 3.11 released
National Center for Biotechnology Information (NCBI) Conserved Domain Database (CDD) version 3.11 is now available with 596 new or updated NCBI-curated and 49,641 total domain models. The new version now contains the most recent Pfam release 27. Updates to the Conserved Domain Database include...Tags: Conserve, Domain, CDD, PSSMs, NCBI
3717 days ago
Update Genome Workbench 2.7.15 released
NCBI Genome Workbench is an integrated application for viewing and analyzing sequence data. With Genome Workbench, you can view data in publically available sequence databases at NCBI, and mix this data with your own private data. Genome Workbench can display sequence data in many ways, includ...Tags: Bioinformatics, Journals, Computational Biology, NCBI, Workbench, Genome, Visualization
3710 days ago
Tags: NCBI, Gene, Screencast
3618 days ago