Results for "NGS"
Users
About me: ...ic biological questions pertaining to these domains. It is obvious in computational biology/ bioinformatics area to get distracted by the flood of NGS and epigenomic data, but curr...67 days ago
- About me: I am new to bioinformatics. I recently join B.Tech Bioinformatics courses. Wish to interact amonst other bioinformatician and learn new things.
3619 days ago
- +20 more Users
Blogs
List of bioinformatics packages for NGS analysis !
Package suites gather software packages and installation tools for specific languages or platforms. We have some for bioinformatics software. Bioconductor &nd...1130 days ago
Integrative RNA and ChIP-Seq analysis of regulatory T-cells
...egrative RNA and ChIP-Seq analysis of regulatory T-cells , a Strand NGS application note describes how integrated multi-omics functionality in Strand NGS was used to find the regulato...3185 days ago
- +12 more Blogs
Bookmarks
DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
...g tools are based on data generated from a specific sequencing technology, the models proposed in DAVI are generic and can be used across different NGS technologies as well as acros...1134 days ago
Next Generation Sequencing (NGS) Tutorials
...Cornell University provide an NGS workshop tutorial at http://chagall.med.cornell.edu/NGScourse/ You can also ad...============================ NGS data analysis pipelines De...ic-phd-school/course-schedule/ngsmetagenomics/ RNASeq:http://w...3475 days ago
- +56 more Bookmarks
Pages
Genome Assembly Tools and Software - PART2 !!
...e reads into haplotypes. GAM-NGS 1.1b – Genome Assemblie...uction Using Incremental HashingStringGraph is a novel, ha...contig sequences (FASTA) and NGS paired-read data (FASTA or FA...reads Filtering and ScaffoldingSLIQ , a set of simple lin...2674 days ago
Awesome perl frameworks, libraries and software - PART 2
...R-1035955. Any opinions, findings, and conclusions or recommend...azon-MWS - Perl API bindings to Amazon Marketplace Web Ser...;- version agnostic Perl bindings for zeromq avar/sendmail-pmi...e-MtGox - MtGox API bindings for Perl masartz/p5-webservi...2482 days ago
Top-level pages
- ...called the “high-throughput next generation sequencing” (HT-NGS). The decreasing genome seque...level, speed up the genomic sequencing projects. In the fast growing HT-NGS technologies, the main challe...
3936 days ago
Perl one-liner for bioinformatician !!!
With the emergence of NGS technologies, and sequencing data most of the bi...code and they do one thing really well. These things include changing line spacing...ascii)'#converts ascii values into character strings.perl -le '@odd = grep {$_ % 2...3616 days ago
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Wire posts
News
NGS course Medical Genomics, scheduled for 17-20 September 2013 in UZ Leuven (Belgium).
This course is open to all students and postdocs and registration for all academic participants is free of charge. To help us in organizing the course, please registe...3907 days ago
Accelerating Biology 2014:The Next Wave (18-22 February, 2014)
...eing made at a rapidly increasing pace, largely due to new technologies and a large amount of automation. The advent of Next Generation Sequencing (NGS) technology has brought in a...3833 days ago
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Opportunity posts
NGS & Bioinformatics Summit Europe
NGS & Bioinformatics Summit Europe Conference...rmany Website: https://www.gtcbio.com/conference/ngseurope-overview Contact pers...isten Starkey We welcome you to join us at GTC’s NGS & Bioinformatics Summit E...3937 days ago
Structural polymorphism analysis from NGS data
...er, is seeking a bioinformatician to analyze Next Generation Sequencing (NGS) data analysis. In the contex...-de-bioinformatique) which has computational facilities and expertise in NGS data analysis, and will benef...3937 days ago
- +64 more Opportunity posts
ResearchLabs posts
- ...ysis of Residues on Protein Families Gene/Protein Networks Genome structure & base composition Highthroughput data analysis from NGS Lab Page http://gabi.cidbi...
3791 days ago
- We investigate genome evolution across the plant kingdom at different levels of complexity: •DNA sequences (NGS-based genome analysis) •Chromosomes (chromosome rearrangements, k...
1203 days ago
Bio-Scripts
- (JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1205 days ago
Install grabseqs using conda !
vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.1042 days ago
Polls
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a programming language which is compatible with most bioinformatics tools or software. I basica...3519 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3514 days ago
Groups
Next Generation Sequencing (NGS)
This group meant to discuss different sequencing methods and their data analysis. Now, sequencing is almost one of the most popular technique scientific fraternity pu...3895 days ago
...nfo%3Adoi%2F10.1371%2Fjournal.pcbi.1000667 Human microbiome Project: http://www.hmpdacc.org/ Tools: http://bioinformaticssoftwareandtools.co.in/ngs.php http://blog.metagenomics...3692 days ago
Tags
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell University provide an NGS workshop tutorial at http://chagall.med.cornell.edu/NGScourse/ You can also add your favourite NGS educational material, or workshop tutorial by commenting on this bookmarks for user benefit. Understandin...Tags: NGS, Tutorial, Education, Workshop, Pipeline
3475 days ago
Managing and Analyzing Next-Generation Sequence Data
Centralized Bioinformatics Core Facilities provide shared resources for the computational and IT requirements of the investigators in their department or institution. As such, they must be able to effectively react to new types of experimental technology. Recently faced with an unprecedented floo...Tags: Bioinformatics, Computational Biology, Data, Managment, NGS
3626 days ago
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Comments
Comment on "Kraken: ultrafast metagenomic sequence classification using exact alignments"
Useful links https://genomics.sschmeier.com/ngs-taxonomic-investigation/index.html777 days ago
- ...e and visualise results from numerous tools (FastQC, HTSeq, RSeQC, Tophat, STAR, others..) across all samples into a single report. NGSQC NGSQC: cross-platform quality ana...
2125 days ago
- +31 more Comments
