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Results for "NGS"

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  • Jitendra Narayan

    R getting strong for NGS analysis http://manuals.bioinformatics.ucr.edu/home/ht-seq #Packages #NGS #R #Bioconductor #Bowtie #Sequence #Analysis #SNP

    Tags: Packages, NGS, R, Bioconductor, Bowtie, Sequence, Analysis, SNP

    3615 days ago

  • John Parker

    Next generation sequencing in R or bioconductor environment

    There are many R software and bioconductor packages for NGS data analysis, some of them are as follows Biostrings The Biostrings package from Bioconductor provides an advanced environment for efficient sequence management and analysis in R. It contains many speed and memory effective string con...

    Tags: Bioinformatics, Computational Biology, NGS, R, Bioconductor, Packages, Modules, Next generation sequencing

    3615 days ago

  • Rahul Nayak

    NGSplot program allows you to easily visualize your NGS samples at functional genomic regions. https://code.google.com/p/ngsplot/ #NGS #ngs #Plot #ngsplot #Visualize #R

    Tags: NGS, ngs, Plot, ngsplot, Visualize, R

    3614 days ago

  • Surabhi Chaudhary

    Commercial and public next-gen-seq (NGS) software

    Integrated solutions CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq software that extends the CLCbio Main Workbench software. Includes SNP detection, CHiP-seq, browser and other features. Commercial. Wind...

    Tags: Bioinformatics, Computational Biology, NGS, Next generation sequencing, Tools, Software, SNP, Assembly, Pipeline

    3509 days ago

  • Radha Agarkar

    Is Linux OS necessary for Bioinformatics? If yes which one is the best for NGS analysis.

    I am currently working on NGS, and looking for a nice OS to handle huge amount of genomics data with an ease. Someone suggested me that Window OS will be a bad idea to use for NGS analysis. I need your valuable suggestion for the best. Thanks

    Tags: NGS, OS, Linux, Window, Best

    3614 days ago

  • Radha Agarkar

    Radha Agarkar

    A bioinformatician from Maharashtra, India

    Skills: Perl, BioPerl, Python, BioPython, NGS, Epigenetics

    1230 days ago

  • Jitendra Narayan

    Assemble short reads http://ged.msu.edu/angus/tutorials/short-read-assembly.html #Tutorial #ABySS #Bacteria #Reads #Assembly #Genomics #NGS

    Tags: Tutorial, ABySS, Bacteria, Reads, Assembly, Genomics, NGS

    3611 days ago

  • Alok Prajapati

    Can you please recommend me some tutorial for NGS data analysis?

    Hi Bioinformatician,I am newbie bioinformatician interested in knowing something more about next generation sequencing (NGS) and learn to interpret the data obtained from these technologies. In particular I want to know what kind of analyses is possible to perform on these data and what kind of t...

    Tags: Bioinformatics, Computational Biology, NGS, Tutorial, Links, Data, Analysis, Tools

    3597 days ago

  • Alok Prajapati

    Bioinformatics tutorial at http://www.ebi.ac.uk/training/online/course/ebi-next-generation-sequencing-practical-course/how-take-course #Tutorial #Notes #NGS #EBI #Online #Course

    Tags: Tutorial, Notes, NGS, EBI, Online, Course

    3597 days ago

  • John Parker

    Bioinformatics algorithms tutorials

    Useful bioinformatics tutorial, such as De Bruijn Graphs for NGS AssemblyAlgorithms for PacBio ReadsSoftware and Hardware Concepts for BioinformaticsFinding us in Homolog.us (Search Algorithms)NGS Genome and RNAseq Assembly - a Hands on PrimerIntroduction to PERL, Python, R and C/C++ for Bioinfo...

    Tags: Bioinformatics, Computational Biology, NGS, Tutorial, Algorithms, Concept

    3593 days ago

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