Results for "NGS"

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  • RAMICS substantially outperforms other mapping approaches for alignment of coding DNA to reference sequences. http://hiv.sanbi.ac.za/tools#/ramics #Tools #Alignment #NGS #RAMICS

    Tags: Tools, Alignment, NGS, RAMICS

    1034 days ago

  • SPAdes Genome Assembler! http://bioinf.spbau.ru/en/spades #Genome #Assembler #Omics #NGS

    Tags: Genome, Assembler, Omics, NGS

    1034 days ago

  • https://github.com/chapmanb/bcbio-nextgen #NGS #SNP #Variants #RNASeq

    Tags: NGS, SNP, Variants, RNASeq

    1034 days ago

  • WGS/WES Mapping to Variant Calls - Version 1.0! http://www.htslib.org/workflow/ #Omics #NGS #WGS #SNP

    Tags: Omics, NGS, WGS, SNP

    976 days ago

  • Live webinar on long reads! http://programs.pacificbiosciences.com/l/1652/2014-06-16/2w46dr #PacBio #LongReads #NGS #Omics #Seq

    Tags: PacBio, LongReads, NGS, Omics, Seq

    1033 days ago

  • Genomic Medicine - Bruce Korf (2014)

    May 21, 2014 - Current Topics in Genome Analysis 2014 A lecture series covering contemporary areas in genomics and bioinformatics. More: http://www.genome.gov/COURSE2014

    Tags: Bioinformatics, Genomics, Medicine, NGS

    1034 days ago

  • Orione – a web-based framework for NGS analysis in microbiology

    End-to-end NGS microbiology data analysis requires a diversity of tools covering bacterial resequencing, de novo assembly, scaffolding, bacterial RNA-Seq, gene annotation and metagenomics. However, the construction of computational pipelines that use different software packages is difficult due t...

    Tags: Bioinformatics, Computational Biology, NGS, Orione, Microbiology, Visualization

    1005 days ago

  • Linux one-liner. https://wikis.utexas.edu/display/bioiteam/Scott%27s+list+of+linux+one-liners #Linux #Oneliner #NGS

    Tags: Linux, Oneliner, NGS

    1016 days ago

  • Integrative Genomics Viewer (IGV) tutorial

    The Integrative Genomics Viewer (IGV) from the Broad Center allows you to view several types of data files involved in any NGS analysis that employs a reference genome, including how reads from a dataset are mapped, gene annotations, and predicted genetic variants. http://www.broadinstitute.org/...

    Tags: Bioinformatics, Computational Biology, NGS, IGV, Visualization, Tutorial

    1016 days ago

  • COSMOS, our workflow management system for NGS data

    COSMOS, our Python-based management system for implementing large-scale parallel workflows focusing on, but not restricted to, large-scale short-read "NGS" sequencing data is open-access published via Advance Access in Bioinformatics (Gafni et al. 2014).  It is also available for download fo...

    Tags: Bioinformatics, Computational Biology, NGS, COSMOS, Python, Workflow

    1005 days ago