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R is a free software programming language and software environment for statistical computing and graphics. The R language is widely used among statisticians and data miners for developing statistical software and data analysis. Polls and surveys of data miners are showing R's popularity has incre...Tags: R, Version, New, Upgrade, R 3.0.3
3693 days ago
List of GOI approved peer reviewed bioinformatics and computational biology journals
Unfortunately, we now live in a world where the integrity of peer-reviewed journals is being threatened by the rise of the academic version of fake news – something many call “predatory publishing". Mostly in academic publishing world, "predatory open access publishing" is an ex...Tags: Bioinformatics, Journals, Publication, Predatory, List, Valid, India, GOI, Approved, Editorial, Computational, Biology, Fake, Deceptive, New, Report
2551 days ago
GRAbB: Selective Assembly of Genomic Regions, a New Niche for Genomic Research
GRAbB is shown to be more efficient than MITObim in terms of speed, memory and disk usage. The other functionalities (handling multiple targets simultaneously and extracting homologous regions) of the new program are not matched by other programs. The program is available with explanatory documen...Tags: GRAbB, Selective, Assembly, Genomic, Regions, New, Niche, Genomic, Research
1910 days ago
New Layout for BLAST ftp Database Site
As announced previously, the new default database version for BLAST+ is dbV5. To complete this transition, the ftp database site will be updated to support this change. We expect this change to happen around February 4th, please adjust your scripts or procedur...Tags: New, Layout, BLAST, ftp, Database, Site
1550 days ago
New Machine Learning Packages in R
Machine Learning autokeras v1.0.1: Implements an interface to AutoKeras, an open source software library for automated machine learning. See README for an example. MTPS v0.1.9: Implements functions to predict simultaneous multiple outcomes based on revised stacking algo...Tags: Machine, Learning, New, R
1484 days ago
auN: a new metric to measure assembly contiguity
Given a de novo assembly, we often measure the “average” contig length by N50. N50 is neither the real average nor median. It is the length of the contig such that this and longer contigs cover at least 50% of the assembly. A longer N50 indicates better contiguity. We can si...Tags: auN, new, metric, measure, assembly, contiguity
626 days ago
