List of generic simulation software/tools/resource with brief description and homepage !!!
...mla GenomeSIMLA is currently under development- however, we have a beta release that we are asking to be...lation http://www2.unil.ch/popgen/softwares/quantinemo/RECOAL Simulates new haplotype data from a reference p...3722 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them are as follows Biostring...he "How to forge a BSgenome data package" Vignette for instructions to create a new BSg...3609 days ago
3481 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...l pair level; "pending public release" Input: Output: CL...: VCF, BED Output: VCF (with new ANN field, also used in ANNOVAR a...tegrate into pipeline (Latest Release- July 2015) Input:VCF, tab-d...nts in noncoding Annotations; New version released July 2015; Comma...2893 days ago
Genome Assembly Tools and Software - PART1 !!
...growing gap between the output of new generation massively parallel...the contigs file, Bandage opens up new possibilities for analysing d...nd superb technical support. First released almost 15 years ago, Seq...and other warnings, and produces a new broken assembly based on the erro...2670 days ago
Python learning resources for bioinformatics and computational biologist !
...ntation (PDF, HTML, TEXT) (2.x) Python 2.7 quick reference - New Mexico Tech (2.7) Python 3 O...ition) (PDF, HTML) Web2py: Complete Reference Manual, 6th Edition (pre-release) (2.5 - 2.x) Wikibooks:...2240 days ago