Results for "Optimized"
Blogs
Computer simulation of genetic mechanism !!
...tor Rose Random model of sequence evolution http://bibiserv.techfak.uni-bielefeld.de/rose/ scrm A coalescent simulator optimized for long sequences and large...2965 days ago
Live Webinar on RNA-Seq Data Analysis on 9 Nov 2016
...n overview of the features in the RNA-Seq data analysis workflow in Strand NGS and also highlights on parameters within each feature that can be optimized depending on datasets and ana...2745 days ago
Bookmarks
Simons Genome Diversity Project
...quenced to at least 30x coverage using Illumina technology. The sequencing reads were mapped and genotyped using a customized procedure that was optimized for population genetic analys...1082 days ago
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
...g the target fragment size as input. In addition, it implements a statistical test for minimizing false-positive results. Together with a highly optimized implementation, it can merge...2941 days ago
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Pages
Awesome perl frameworks, libraries and software - PART 3
...ojolicious kzys/test-mock-recorder - Record-and-verify style mocking library for Perl kpumuk/mysqlsla-bdb - MySQL Slow Logs Analyzer optimized to work with huge logs (use B...2484 days ago
Top-level pages
Commercial and public next-gen-seq (NGS) software
...by Gabor Marth at Washington University. This version is specifically optimized for the analysis of large num...aphical viewer, but again for its own alignment format.SSAHA has been optimized for short-reads, too. But yes...3509 days ago
Software packages for next gen sequence analysis
...ayesShort - A re-incarnation of the PolyBayes SNP discovery tool developed by Gabor Marth at Washington University. This version is specifically optimized for the analysis of large num...3232 days ago
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News
- ...release relative to the last public release(9.12). Major user-visible changes include: # Modeller now includes a variety of SOAP (statistically optimized atomic potential) scores for...
3724 days ago
Video
- Living cells are a special form of condensed matter, matter that has been optimized by evolution to perform functions. Are there laws of nature that govern living matter, that stem fro...
3795 days ago
Wordpress Tutorial | How To Make A Website Properly With WordPress | Step-By-Step Video Training
...s WordPress Tutorial for beginners will show you how to make a website A-Z step-by-step! Learn how to PROPERLY build a WordPress Website that is optimized correctly for visitors/custom...3545 days ago
Tags
CrocoBLAST: Optimized parallel implementation of local sequence alignment algorithms
Local sequence alignment is a cornerstone of bioinformatics, allowing to compare the amino-acid sequences of different proteins, or the nucleotide sequences of different pieces of DNA. The Basic Local Alignment Search Tool (BLAST) has revolutionized the field of bioinformatics, and is currently i...Tags: CrocoBLAST, Optimized, parallel, local, sequence, alignment, algorithms
2466 days ago
odgi: optimized dynamic genome/graph implementation
odgi provides an efficient and succinct dynamic DNA sequence graph model, as well as a host of algorithms that allow the use of such graphs in bioinformatic analyses. Careful encoding of graph entities allows odgi to efficiently compute and transform pangenomes with mini...Tags: odgi, optimized, dynamic, genome, graph, implementation, genome, assembly, graph
813 days ago
