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Results for "Orthologs"

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• • Jitendra Narayan@admin

  

  BUSCO

  Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs More at http://busco.ezlab.org/

  Tags: Bioinformatics, Computational Biology, Education, Cancer, Research, BUSCO, Genome, Annotation, Pipeline, NGS, Assembly, Orthologs

  2994 days ago

• • Anjana@anjana

  

  BUSCO: Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs

  High-throughput genomics has revolutionized biological research, however, while the number of sequenced genomes grows by the day, quality assessment of the resulting assembled sequences remains complicated and mostly limited to technical measures like N50.  BUSCO provides measures for q...

  Tags: Bioinformatics, Validation, Assembly, BUSCO, Orthologs, NGS

  2902 days ago

• • Jit@jit.aber

  

  Quickly #Finding #Orthologs as Reciprocal Best #Hits with #BLAT, #LAST, and #UBLAST: How Much Do We Miss? http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0101850

  Tags: Finding, Orthologs, Hits, BLAT, LAST, UBLAST

  2531 days ago

• • Jit@jit.aber

  

  OrthoGNC: A Software for Accurate Identification of Orthologs Based on Gene Neighborhood Conservation

  Orthology relations can be used to transfer annotations from one gene (or protein) to another. Hence, detecting orthology relations has become an important task in the post-genomic era. Various genomic events, such as duplication and horizontal gene transfer, can cause erroneous assignment of o...

  Tags: OrthoGNC, Software, Accurate, Identification, Orthologs, Gene, Neighborhood, Conservation

  2349 days ago