Results for "Oxford"


  • Oxford Nanopore Sequencing, Hybrid Error Correction, and de novo Assembly of a Eukaryotic Genome

    Monitoring the progress of DNA molecules through a membrane pore has been postulated as a method for sequencing DNA for several decades. Recently, a nanopore-based sequencing instrument, the Oxford Nanopore MinION, has become available that we used for sequencing the S. cerevisiae genome. To make...

    Tags: Oxford, Nanopore, Sequencing, Hybrid, Error, Correction, de novo, Assembly, Eukaryotic, Genome

    55 days ago

  • Bioinformatics tools developed for Oxford Nanopore data analysis !

    MinION is the only portable real-time device for DNA and RNA sequencing. Each consumable flow cell can now generate 10–20 Gb of DNA sequence data. Ultra-long read lengths are possible (hundreds of kb) as you can choose your fragment length. One of the technical advantage...

    Tags: Bioinformatics, tools, developed, Oxford, Nanopore, analysis, ONT

    26 days ago

  • orthodotter: Synteny plots (oxford grid)

    orthodotter -h -------------------------------------------------------------------------------- orthodotter - Plot orthologous genes on an oxford grid. -f <file> : input file, containing orthologous genes, default is stdin species chr-name start end spe...

    Tags: orthodotter, Synteny, plots, oxford, grid

    167 days ago