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Bioinformatics tools developed for Oxford Nanopore data analysis !
...s for Oxford Nanopore MinION long reads LQSDALIGNER, Celera OLC Nanocorrect, Nanopolish correctorhttps://github.com/jts/nanopolish PBcRHGAP or BLASR, Celera OLC PBcR correctorhttp://wgs-assembler...2309 days ago
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WGS Celera Assembler version 8.3rc2
...er-rwxrwxr-x 1 urbe urbe 604K Apr 10 11:40 overmerrylrwxrwxrwx 1 urbe urbe 4 Apr 10 11:41 pacBioToCA -> PBcR-rwxrwxr-x 1 urbe urbe 131K Apr 10 11:41 PBcR-rwxrwxr-x 1 urbe urbe 2,9M Ap...2571 days ago
miniasm: very fast OLC-based de novo assembler for noisy long reads
...s.fa And then count how many contigs: grep ">" reads.fa | wc -l # Download sample PacBio from the PBcR website wget -O- http://www.cbcb.umd.edu/software/PBcR/data/selfSampleData.tar.gz |...2340 days ago
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WGS Celera Assembler version 8.3rc2
These are release notes for Celera Assembler version 8.3rc2, which was released on May 24, 2015.This distribution package provides a stable, tested, documented version of the software. The distribution is usable on most Unix-like platforms, and some platforms have pre-compiled binary distri...Tags: Bioinformatics, wgs-assembler, WGS, PBcR, Pacbio, Correct, Packages, Tools, Simulation, Fastq
2571 days ago
