Results for "Package"
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R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This allows us to draw informative summ...3930 days ago
- ...ect access to single results, and performing logical operations over them. Massimiliano Orsini and Simone Carcangiu develope a new and fast fast package "BlaSTorage" to parse and sto...
3880 days ago
RNA-Seq Data Pathway and Gene-set Analysis Workflows
...bsp;RNA-Seq data pathway analysis and gene-set analysis. The gage package (2.12.0) now includes a new t.... Reference: Please check it out:http://bioconductor.org/packages/release/bioc/html/gage.htmlh...3823 days ago
- ...on from here http://cran.rstudio.com/ . Or, if you are using Windows, you can upgrade to the latest version using the installr package http://cran.r-project.org/web/packages/installr/ . Simply run the f...
3699 days ago
- ...eR is a GUI for base graphics in R by http://www.maximeherve.com/. The package provides a graphical user int...ng R code in a file created by GrapheR. For more details read also the package vignette, which is available...
3542 days ago
Surrogate Variable Analysis (SVA)
The sva package contains functions for removing bat...t experiment. Specifically, the sva package contains functions for the id...or latent sources of noise. The sva package can be used to remove artifac...More at http://www.bioconductor.org/packages/release/bioc/html/sva.html3465 days ago
- An R package for analysing ontologies and protein domain annotations has...iology (http://dx.doi.org/10.1371/journal.pcbi.1003929). The package is distributed as part of CRAN (http://cran.r-project.org/package=dcGOR), and also at GitHub fo...
3456 days ago
- The pacman package is an R package management tool that combines the...intuitively named functions. This package is ideally added to .Rprofile...ions.Function names in the pacman package follow the format of p_xxx wh...y or require functions and if the package isn’t available locally...
3356 days ago
- ...g/loading the latest installr package: install.packages("installr"...New function dir.exists() in package base to test efficiently whet...e dget() many times faster). Packages may now use a file of common...New function hsearch_db() in package utils for building and retrie...
3295 days ago
- ...to the latest version of R using the installr package. Simply run the following code in Rgui: install.packages("installr") # install setI...st version of R). I try to keep the installr package updated and useful, so if you...
2914 days ago
