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Bio-Scripts

• • Jit@jit.aber

  

  Install grabseqs with conda !

  (JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1207 days ago

• • Neelam Jha@neelam

  

  Install NCBI entrez-direct and esearch using conda !

  ...vironment: done ==> WARNING: A newer version of conda exists. 13.9-pl5262he881be0_2 Proceed ([y]/n)? y Downloading and Extracting Packages entrez-direct-13.9 | 5.2 M...

  1092 days ago

• • LEGE@lege

  

  Install CANU with conda !

  ...ronment: done ==> WARNING: A newer version of conda exists. bioconda/label/cf201901 Proceed ([y]/n)? y Downloading and Extracting Packages canu-1.4 | 7.0 M...

  1045 days ago

• • LEGE@lege

  

  Install Shasta using conda !

  vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda shasta Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1045 days ago

• • LEGE@lege

  

  Install CVSTK using codna !

  vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda csvtk Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1045 days ago

• • LEGE@lege

  

  Install seqkit using conda !

  vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda seqkit Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1045 days ago

• • LEGE@lege

  

  Install Minimap2 using conda !

  vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda minimap2 Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1045 days ago

• • LEGE@lege

  

  Install seqtk using conda !

  vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda/label/cf201901 seqtk Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1045 days ago

• • LEGE@lege

  

  install gap2seq using conda !

  ...RNING: A newer version of conda exists. bioconda/label/cf201901::gap2seq-2.0-boost1.61_1 Proceed ([y]/n)? y Downloading and Extracting Packages gap2seq-2.0 | 4.6 M...

  1045 days ago

• • BioQueen@bioqueen

  

  Converting from Windows-style to UNIX-style line endings with dos2unix

  ...pendency tree Reading state information... Done The following packages were automatically installed...gl1-mesa Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: dos2uni...

  1167 days ago

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