BOL: Results for "Paint"

Results for "Paint"

- Shruti Paniwala@shruti
fineSTRUCTURE v2 & GLOBETROTTER
Software available at this site FineSTRUCTURE version 2, a pipeline for running ChromoPainter and FineSTRUCTURE for population inference. A GUI is available for interpretation. Download from the Downloads page. FineSTRUCTURE R scripts, a facility for exploring the results when the GUI is un...
Tags: Bioinformatics, Chromosome, Paint, R, Script
2622 days ago
- Shruti Paniwala@shruti
Ideoplot
Simple ideogram plotting and annotation in R. Basic usage: Rscript Ideoplot.R --heatmap hm.bed --annotate annotations.bed --out ideogram.pdf -or- Rscript Ideoplot.R --annotate annotations.bed Options --ideobed, i A bed file of reference contig lengths/chromosome names --heatmap, -h ...
Tags: Bioinformatics, Chromosome, Paint, R, Script
2622 days ago
- Jit@jit.aber
MafTools
maftools - An R package to summarize, analyze and visualize MAF files. Introduction. With advances in Cancer Genomics, Mutation Annotation Format (MAF) is being widley accepted and used to store variants detected. The Cancer Genome Atlas Project has seqenced over 30 different cancers with sample...
Tags: Bioinformatics, Maf, Tools, MafTools, Paint, Plot, Read
2619 days ago