Results for "Pathway"

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  • Which are the best statistical programming languages to study for a bioinformatician?

    In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor packages. Matlab had a lot of powerful tools and was easy to use, whereas SPSS is for non-programmers and R need programming skills. I am ...

    Tags: R, SAS, SPSS, Matlab, Bioconductor, Genomics, Pathway, Biostatistics

    3941 days ago

  • Project Assistant in SERB-DST sponsored project

    Advertisement for post of Project Assistant in SERB-DST sponsored project @ Bioinformatics, Karunya University Applications are invited for the post of Project Assistant to work in the following project. • Title of the project: "A novel approach for the identification of key regulatory mo...

    Tags: Bioinformatics, Research Associate, Karunya, DBT, Pathway

    3918 days ago

  • RNA-Seq Data Pathway and Gene-set Analysis Workflows

    It describe the GAGE (Luo et al., 2009) /Pahview (Luo and Brouwer, 2013) workflows on RNA-Seq data pathway analysis and gene-set analysis. The gage package (2.12.0) now includes a new tutorial, “RNA-Seq Data Pathway and Gene-set Analysis Workflows“. First cover a full workf...

    Tags: R, Bioconductor, RNA-seq, GAGE, Pathway

    3822 days ago

  • List of gene ontology software and tools

    The Gene Ontology (GO) is a set of associations from biological phrases to specific genes that are either chosen by trained curators or generated automatically. GO is designed to rigorously encapsulate the known relationships between biological terms and and all genes that are instances of these ...

    Tags: GO, Gene, Ontology, Gene Ontology, Enrichments, Pathway, Annotation

    3699 days ago

  • A tool to edit and analyze biological pathways. http://www.pathvisio.org/ #Pathway #Analyse #Tool #Edit #Biological

    Tags: Pathway, Analyse, Tool, Edit, Biological

    3598 days ago

  • Ten Years of Pathway Analysis: Current Approaches and Outstanding Challenges. http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002375 #Pathway #Challenges #Tools

    Tags: Pathway, Challenges, Tools

    3598 days ago

  • SANTA: Quantifying the Functional Content of Molecular Networks http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1003808 #Network #Pathway #Molecular #SANTA

    Tags: Network, Pathway, Molecular, SANTA

    3512 days ago

  • iPathwayGuide- most advanced, sophisticated and user-friendly pathway analysis tool http://www.advaitabio.com/ipathwayguide.html#page=page-1 #Pathway #Tool

    Tags: Pathway, Tool

    3509 days ago

  • Enrichr: a comprehensive gene set enrichment analysis

    Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this domain called Enrichr. Enrichr currently contains a large collection of diverse gene set libraries available for analysis and down...

    Tags: Bioinformatics, Analysis, Enrichment, Enrichr, Web, Server, GO, Pathway, Genes, BED, Ontologies, Drug, Cell, Disease

    2554 days ago

  • KEGG Mapper – Reconstruct Pathway

    Reconstruct Pathway is a KEGG PATHWAY mapping tool that assists genome and metagenome annotations. The input data is a single gene list (for a single organism) or multiple gene lists (for multiple organisms) annotated with KEGG Orthology (KO) identifiers or K numbers. Each line of the gene l...

    Tags: KEGG, Mapper, Reconstruct, Pathway, Bacteria

    1960 days ago