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• • Abhimanyu Singh@abhimanyu

  

  To print the matching pattern line perl -ne '/pattern/ && print' infile.gtf #Perloneliner #Tipsoftheday

  3852 days ago

• • Jit@jit.aber

  

  Count the number of occurrence of pattern in a file using Perl. perl -e '$_ = <>; print scalar ( () = m/needle/g ), "\n"' #Perl #Perloneliner #Count #Occurrence

  3599 days ago

• • Rahul Agarwal@raag

  

  Suffix Trees ! http://www.cs.cmu.edu/~ckingsf/bioinfo-lectures/suffixtrees.pdf #SuffixTree #Pattern

  3597 days ago

• • Jit@jit.aber

  

  Count the number of "pattern" occurrence in a file grep -o 'pattern' anc.annots.gff | wc -l #Linux #grep #Count #Number #Occurrence

  3599 days ago

• • John Parker@parker

  

  Search a PATTERN in a file and print the line. perl -ne '/PATTERN/ && print' fileName #Perl #Pattern #Print #Search #Line

  3497 days ago

• • Jit@jit.aber

  

  Print all the values beetween a pattern "abc" > awk '/abc/{flag=1;next}/mno/{flag=0}flag' file #awk #print #range #pattern

  2992 days ago

• • Nirmal Pal@nibex

  

  Researchers have succeeded in permanently rewriting flatworms' regenerative body shape by resetting their internal bioelectric pattern memory, causing even normal-appearing flatworms to harbor the "co

  2515 days ago

• • Jit@jit.aber

  

  Find a pattern in first 7 characters of reads. bioawk -c fastx 'substr($seq,0,7) == $TAG { print }' reads.fq.gz #Reads #NGS #Extract #Pattern

  2484 days ago

• • Rahul Nayak@rahul

  

  #Extract all the files from a #directory and #sub-dir with #pattern. $ find TrimmedDir -type f | grep "L_" | xargs -i cp {} .

  2213 days ago

• • Jit@jit.aber

  

  Find matching file names with pattern in a directory. $ ls -dq *_name2search_* | wc -l #file #search #hits #pattern #names #directory

  2220 days ago

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