Results for "Perl"

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  • How to install Perl modules manually, using CPAN command, and other quick ways

    As a bioinformatics programmer, and crunchy data analyser you need to install several perl modules and dependencies. Installing Perl modules manually by resolving all the dependencies is  tedious and annoying process. Some of the packages like GD is the real pain. However, Installing Perl mo...

    Tags: Perl Modules, Perl, Packages, Yum, Quick, CPAN, BioPerl

    1617 days ago

  • Five unique traits of effective computational biologist

    Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological data. Being a great biological programmer or bioinformatician involves more than writing code that works. The biological programmers who rise to the top ranks of their profession are not ...

    Tags: Biological Programmers, Computational Biology, Bioinformatics, Programmers, Traits, Perl

    1617 days ago

  • Installing Perl GD Module

    In comparative genome analysis work, we usually compare more than two genomes and looks for syntenic regions amongst them. In my research I used Evolution Highway (RH) http://eh-demo.ncsa.uiuc.edu/, which is a collaborative project designed to provide a visual means for simultaneously comparing...

    Tags: Perl, GD, Modules, Circos, Evolution Highway, MAc Os, MS Window, Linux

    1606 days ago

  • How to install Perl modules on Mac OS X in easy steps !!

    Today at work, I learned how to install Perl modules using CPAN. It’s a lot easier than I thought. You see, for the past couple of years, I’ve been a bit frustrated because OS X does not come with a whole lot of Perl modules pre-installed, and for all I googled, I couldn’t...

    Tags: Bioinformatics, Perl, Mac, MacOSX, Modules, Install, CPAN

    421 days ago

  • Perl way to check if an array contains values

    Perl is always is known for their flexibility (There is more than one way to do it). Followings are the quick way to check if a value exist in an array. do_something if 'flour' ~~ @ingredients   # ~~ operand.   BEWARE: it is broken.do_something if grep {$_ eq 'flour'} @ingredients ...

    Tags: Perl, Tricks, Array, Find, Check

    280 days ago