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Results for "Phylogeny"

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• • Jitendra Narayan@admin

  

  Phylogenetic for Bioinformatics

  Biologists estimate that there are about 5 to 100 million species of organisms living on Earth today. Evidence from morphological, biochemical, and gene sequence data suggests that all organisms on Earth are genetically related, and the genealogical relationships of living things can be represent...

  Tags: Phylogeny, Genomics, Tutorial, Softwares, PHYLIP, Lectures Notes, Links

  3936 days ago

• • Rahul Agarwal@raag

  

  "entities must not be multiplied beyond necessity" -Occam's razor principle for parsimony in case of phylogeny. #Phylogeny #Parsimony #Tree

  Tags: Phylogeny, Parsimony, Tree

  3905 days ago

• • Rahul Agarwal@raag

  

  Phyloinformatic Literature Unlocking Tools ! http://www.bbsrc.ac.uk/pa/grants/AwardDetails.aspx?FundingReference=BB/K015702/1 #Phylogeny

  Tags: Phylogeny

  3593 days ago

• • Jit@jit.aber

  

  How to read a phylogenetic tree http://epidemic.bio.ed.ac.uk/how_to_read_a_phylogeny #Phylogeny #Tree

  Tags: Phylogeny, Tree

  3479 days ago

• • Jit@jit.aber

  

  iTOL: interactive Tree Of Life

  Interactive Tree Of Life is an online tool for the display and manipulation of phylogenetic trees. It provides most of the features available in other tree viewers, and offers a novel circular tree layout, which makes it easy to visualize mid-sized tree (up to several thousand leaves). Trees...

  Tags: Bioinformatics, Tree, Phylogeny, Visualization, iTOL

  2641 days ago

• • Jit@jit.aber

  

  Lifemap

  Lifemap is an interactive tool to explore the WHOLE NCBI TAXONOMY. The concept used in Lifemap is similar to the one used in cartography with tools like Google Maps© or Open Street Maps: exploring is done by zooming and panning.  The current tree contains ALL species present in NCBI ...

  Tags: Bioinformatics, Lifemap, Tree, Phylogeny, Taxonomy, Draw, View, Zoom, See, France, Interactive

  2572 days ago

• • Jit@jit.aber

  

  Tetra-Nucleotide Analysis

  A tetra-nucleotide is a fragment of DNA sequence with 4 bases (e.g. AGTC or TTGG). Pride et al. (2003) showed that the frequency of tetra-nucleotides in bacterial genomes contain useful, albeit weak, phylogenetic signals. Even though tetra-nucleotide analysis (TNA) utilizes the informat...

  Tags: Bioinformatics, Tetra-Nucleotide, Analysis, Frequency, DNA, Phylogeny, Algorithms

  2548 days ago

• • Neelam Jha@neelam

  

  Phylogenetic tree construction http://math.ucdenver.edu/~billups/courses/ma5610/lectures/lec13_christiaan_large.pdf #Tree #Phylogeny

  Tags: Tree, Phylogeny

  947 days ago

• • Abhinav@abhinav

  

  UPGMA Worked Example

  The tabs below include a walkthrough of clustering 7 biological sequences (A-G) using the Unweighted Pair-Group Method with Arithmetic mean (UPGMA) method. Note that UPGMA is actually a generic method and thus the walkthrough could apply to any objects A-G for which pairwise distances can be calc...

  Tags: UPGMA, Worked, Example, Tree, Phylogeny

  925 days ago

• • BioStar@biostar

  

  Bioinformatics Tools for Phylogeny !

  Direct access to the individual tools available on this server. Multiple Alignment:Phylogeny:Tree viewers:Utilities: MUSCLE PhyML TreeDyn Gblocks T-Coffee / 3DCoffee TNT Drawgram Jalview ClustalW BioNJ Drawtree Readseq ProbCons MrBayes ATV (A Tree V...

  Tags: Tools, Phylogeny, MSA

  171 days ago

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