Results for "Pipeline"

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  • Next Generation Sequencing (NGS) Tutorials

    Institute of computational biomedicine, Cornell University provide an NGS workshop tutorial at http://chagall.med.cornell.edu/NGScourse/  You can also add your favourite NGS educational material, or workshop tutorial by commenting on this bookmarks for user benefit.  Understandin...

    Tags: NGS, Tutorial, Education, Workshop, Pipeline

    919 days ago

  • Next generation sequencing(NGS) books

    Employing different technologies, the purpose of NGS platform is to decode the identity or modification on the nucleotides. NGS platforms evolve quickly and capture the main stream. This bookmark is created to provide NGS online books links.

    Tags: NGS, Pipeline, Method, Books, Tutorial

    1060 days ago

  • NGS analysis pipeline http://www.egr.msu.edu/changroup/Protocols/NGS%20analysis%20example%20of%20a%20pipeline.html #Pipeline #NGS #Genomics #Tutorial

    Tags: Pipeline, NGS, Genomics, Tutorial

    1052 days ago

  • Commercial and public next-gen-seq (NGS) software

    Integrated solutions CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq software that extends the CLCbio Main Workbench software. Includes SNP detection, CHiP-seq, browser and other features. Commercial. Wind...

    Tags: Bioinformatics, Computational Biology, NGS, Next generation sequencing, Tools, Software, SNP, Assembly, Pipeline

    950 days ago

  • Consensus assembly and allele interpretation pipeline. https://github.com/nmdp-bioinformatics/pipeline #Pipeline #Bioinformatics #Assembly

    Tags: Pipeline, Bioinformatics, Assembly

    828 days ago

  • VirVarSeq: a low frequency Virus Variant detection pipeline http://bioinformatics.oxfordjournals.org/content/early/2014/08/31/bioinformatics.btu587.abstract #Pipeline #Variant #VirVarSeq

    Tags: Pipeline, Variant, VirVarSeq

    951 days ago

  • MAKER

    MAKER is a portable and easily configurable genome annotation pipeline.Its purpose is to allow smaller eukaryotic and prokaryotic genome projects to independently annotate their genomes and to create genome databases. MAKER identifies repeats, aligns ESTs and proteins to a genome, produces ab-ini...

    Tags: Bioinformatics, Computational Biology, Education, Cancer, Research, MAKER, Genome, Annotation, Pipeline, NGS, Assembly

    441 days ago

  • BUSCO

    Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs More at http://busco.ezlab.org/

    Tags: Bioinformatics, Computational Biology, Education, Cancer, Research, BUSCO, Genome, Annotation, Pipeline, NGS, Assembly, Orthologs

    441 days ago

  • RATT

    RATT is software to transfer annotation from a reference (annotated) genome to an unannotated query genome. It was first developed to transfer annotations between different genome assembly versions. However, it can also transfer annotations between strains and even different species, like Plasmo...

    Tags: Bioinformatics, Computational Biology, Education, Cancer, Research, RATT, Genome, Annotation, Pipeline, NGS, Assembly

    441 days ago

  • http://blogs.sciencemag.org/pipeline/archives/2016/02/16/thoughts-on-sci-hub #Science #Pipeline

    Tags: Science, Pipeline

    431 days ago