3878 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...a comparison of annotation in two Bos taurus assemblies. Florea et al., PLoS One 6(6):e21400, 2011. PubMedCentral Artemis: an integrated platform for visualization and analysi...3742 days ago
List of bioinformatics open source projects/software.
...amework for data analysis Armadillo workflow platform Tool for designing and execu...http://bio4j.com/ Bio4j is a bioinformatics platform and graph based database buil...ench/index.php/Home Genomic data integration platform GMOD http://www.gmod.org/wi...3720 days ago
List of In-silico Binding Site Prediction Tools
...nal Screen, written by Murad Nayal, was dependent on the obsolete Irix platform and is no longer available. S...Guilloux, Peter Schmidtke and Pierre Tuffery, "Fpocket: An open source platform for ligand pocket detection",...3707 days ago
Commercial and public next-gen-seq (NGS) software
...o map short reads generated with the Illumina platform to reference genome assemblie...SXOligoSearch - SXOligoSearch is a commercial platform offered by the Malaysian base...and Visualization Tool. It provides a generic platform for manipulating, analyzing a...3482 days ago
Rosalind Problem Solution with Perl
Rosalind is a platform for learning bioinformatics and programming through problem solving. Take a tour to get the hang of how Rosalind works. Bioinformatics Textbook Track F...3215 days ago
Software packages for next gen sequence analysis
...o map short reads generated with the Illumina platform to reference genome assemblie...SXOligoSearch - SXOligoSearch is a commercial platform offered by the Malaysian base...and Visualization Tool. It provides a generic platform for manipulating, analyzing a...3205 days ago
Comprehensive list of visualization tools for biological pathways
...ngs of genes http://www.genmapp.org/ Ingenuity IPA Data integration platform and manually annotated pathwa.../www.reactome.org/skypainter-2 WikiPathways Wiki-based, open, public platform dedicated to the curation of...2250 days ago
2677 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...s SOLiD™ and Illumina® platforms.” runs on Windows, fre...s all established NGS sequencing platforms- SOLiD, 454 Life Sciences, G...signed to run on “nux-like platforms” Input: BAM Output:...h SNP annotation for various GWA platforms” Input: Output: HTML...2872 days ago