Results for "Platform"

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  • Cytoscape

    Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of Apps are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.

    Tags: Bioinformatics, Cytoscape, Software, Platform, Visualization, Networks, GO

    487 days ago

  • Anvio

    In a nutshell Anvi’o is an analysis and visualization platform for ‘omics data. Please find the methods paper here: https://peerj.com/articles/1319/ Anvi’o would not have been possible without the help of many people who directly or indirectly contributed to its development. ...

    Tags: Bioinformatics, Analysis, Visualization, Platform, Omics, NGS, Anvio

    463 days ago

  • Pollux: platform independent error correction of single and mixed genomes

    Pollux: General-purpose error corrector that corrects errors introduced by Illumina, Ion Torrent, and Roche 454 sequencing technologies and can be applied to single- or mixed-genome data. In addition to correcting substitution errors, we locate and correct insertion, deletion, and homopolymer err...

    Tags: Pollux, Platform, Independent, Error, Correction, Single, Mixed, Genomes

    126 days ago

  • Web Apollo: a web-based genomic annotation editing platform

    Web Apollo is the first instantaneous, collaborative genomic annotation editor available on the web. One of the natural consequences following from current advances in sequencing technology is that there are more and more researchers sequencing new genomes. These researchers require tools to desc...

    Tags: Web, Apollo, genomic, annotation, editing, platform

    56 days ago

  • eBioKit: a stand-alone educational platform for bioinformatics

    The eBioKit is a system running multiple open source web services on an Apple Mac-mini where all databases are stored locally.This reduces the need for a fast internet connection while giving the users an opportunity to incorporate their data sets in widely used web services. http://journals.plo...

    Tags: eBioKit, stand-alone, educational, platform, bioinformatics

    3 days ago