Integrative Genomics Viewer (IGV) tutorial
...of data files involved in any NGS analysis that employs a reference genome, including how reads from a dataset are mapped, gene annotations, and predicted genetic variants. http://www...3572 days ago
CoronaVIR: Computational Resources on Novel Coronavirus (SARS-CoV-2 or COVID-19)
...RNA based vaccine candidates and potential drug molecules. These are predicted candidates, need to be valida...l, Sumeet, et al. “A Web-based Platform on COVID-19 to Maintain Predicted Diagnostic, Drugand Vaccine C...1092 days ago
Directional dominance on stature and cognition in diverse human populations
...existence of a small though measureable association between genome-wide homozygosity and some vital complex traits... Directional dominance is predicted for traits under directional...3208 days ago
2850 days ago
GeneValidator - Identify problems with predicted genes
GeneValidator helps in identifing problems with gene predictions and provide useful information extracted from analysing orthologs in BLAST databases. The results produc...2797 days ago
CAR: Reconstructing Contiguous Regions of an Ancestral Genome
...r 96.8% of the available human genome sequence data. The precision is further increased by mapping inversions as small as 31 bp. Analysis of the predicted evolutionary breakpoints in t...2532 days ago
Genomicus: genome browser that enables users to navigate in genomes in several dimensions
...ic context of all its orthologous and paralogous copies in all the other sequenced metazoan genomes. Moreover, Genomicus stores and displays the predicted ancestral genome structure in...2347 days ago
Alien_Hunter : prediction of putative Horizontal Gene Transfer (HGT) events
...into a 2-state 2nd order Hidden Markov Model (HMM), in a change-point detection framework, to optimize the localization of the boundaries of the predicted regions. The predictions (emb...2297 days ago
DUPCAR: Reconstructing Contiguous Ancestral Regions with Duplications
...nships in the ancestor. Then a greedy algorithm is used to reconstruct the ancestral orders by connecting genes into contiguous regions based on predicted adjacencies. Computer simulat...2164 days ago
FGENESH - Program for predicting multiple genes in genomic DNA sequences
...it was cited "the most successful (gene finding) program (Yu et al. (2002) Science 296:79) and was used to produce 87% of all high-evidence predicted genes (Goff et al. (2002...1951 days ago