3936 days ago
List of In-silico Binding Site Prediction Tools
...a consensus method metaPocket, in which the predicted sites from four methods: LIGS...structural comparison was performed for the predicted sites, and the similar sites...iction was considered a true-positive if the predicted pocket had at-least 10% overl...3733 days ago
Commercial and public next-gen-seq (NGS) software
...IP fragments, which tends to be shorter than sonication or library construction size estimates, and uses it to improve the spatial resolution of predicted binding sites. MACS also uses...3508 days ago
3485 days ago
Apps for Busy Bioinformatics Researchers !!!
...niProt and PMD. SAASs come from >2600 organisms; ‘human’ being the most prevalent. The impact of each SAAS on protein function is predicted using the SNAP and SIFT algor...3531 days ago
Software packages for next gen sequence analysis
...IP fragments, which tends to be shorter than sonication or library construction size estimates, and uses it to improve the spatial resolution of predicted binding sites. MACS also uses...3232 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...associated information. These somatic mutations can be annotated with predicted transcript and protein effect...ence (looks like you can enter FASTA) Output: Chart with columns for predicted signal, predicted algorithm,...2898 days ago
List of visualization tools for network biology
...reference or human protein-protein interaction network that SNOW hosts http://snow.bioinfo.cipf.es STITCH Resource to explore known and predicted interactions of chemicals and...2277 days ago