Results for "Prokaryotes"

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  • MyPro: A seamless pipeline for automated prokaryotic genome assembly and annotation

    MyPro is an improved genomics software pipeline for prokaryotic genomes. MyPro is user-friendly and requires minimal programming skills. High-quality prokaryotic genome assembly and annotation can be obtained with ease. It performed better than de novo assemblers and contig integration software. ...

    Tags: Bioinformatics, CISA, MyPro, Genome, Annotation, Pipeline, Prokaryotes

    252 days ago

  • Prokka: tool for the rapid annotation of prokaryotic genomes

    Prokka is a software tool for the rapid annotation of prokaryotic genomes. A typical 4 Mbp genome can be fully annotated in less than 10 minutes on a quad-core computer, and scales well to 32 core SMP systems. It produces GFF3, GBK and SQN files that are ready for editing in Sequin and ultimately...

    Tags: Bioinformatics, Analysis, Assembly, Genome, Annotation, Prokaryotes

    171 days ago

  • Bacterial genome assembly !!

    This tutorial will serve as an example of how to use free and open-source genome assembly and secondary scaffolding tools to generate high quality assemblies of bacterial sequence data. The bacterial sample used in this tutorial will be referred to simply as “Species” s...

    Tags: Bioinformatics, Analysis, Assembly, Genome, Annotation, Prokaryotes, Bacteria

    111 days ago

  • NCBI Prokaryotic Genome Annotation Pipeline

    NCBI Prokaryotic Genome Annotation Pipeline is designed to annotate bacterial and archaeal genomes (chromosomes and plasmids). Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as other functional genome units such as structural RNAs, tRNAs, sma...

    Tags: Bioinformatics, Analysis, Assembly, Genome, Annotation, NCBI, Pipeline, Prokaryotes

    100 days ago