Results for "Protein"
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Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical membrane protein (MPs) has hindered thus far the development of reliable knowledge –based potentials that can be used for automatic prediction of trans-membrane (TM) protein structure. While algorithm ...Tags: transmembrane, protein, hidden markov model, viterbi, posterior decoding, classifier, Matlab, Machine Learning, Decoder, Discriminant analysis
3935 days ago
- Enzyme Portal- To look for information about the biology of a protein with enzymatic activity. The enzyme portal integrates many resources, most of them hosted by EBI and also external ones such as BioPortal. Its main goal is to provide information about enzymes in a suitable format, with a...
Tags: protein, enzyme, database
3887 days ago
- "Robert Sapolsky makes interdisciplinary connections between behavioral biology and molecular genetic influences. He relates protein synthesis and point mutations to microevolutionary change, and discusses conflicting theories of gradualism and punctuated equilibrium and the influence of epigenet...
Tags: molecular genetics, DNA, protein, mutation, genomics, genetics, epigenetics, molecular evolution
3863 days ago
- ne PhD position is available at the Bioinformatics Center, Department of Biology, University of Copenhagen, Denmark. The PhD position concerns protein structure prediction, and will be in the Structural Bioinformatics group of Associate professor Thomas Hamelryck. The group is an integrated part ...
Tags: protein, structure prediction, RNA structure, Bayesian algorithm
3604 days ago
eQuant : energy-based quality assessment of protein
Protein structures are of varying quality. Especially, in-silico modeled structures are prone to contain serious errors, which limit the usefulness and reliability of these particular protein structures.eQuant is a service for structure quality assessment of single proteins, which utili...Tags: eQuant, energy-based, quality, assessment, protein
2497 days ago
How to download all mammalian protein fasta files ?
I want to download all the mammalian protein fasta files. Is there any quick way to download all in one click?Tags: mammalian, fasta, protein
2472 days ago
MMseqs2.0: ultra fast and sensitive protein search and clustering suite
MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein sequence sets. MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version, via cygwin) Windows. The software is designed to run on multiple cores and s...Tags: MMseqs2, ultra, fast, sensitive, protein, search, clustering, suite
2226 days ago
- %MM calculates whether a given gene sequence encodes amino acids using the most common codons possible, the least common codons possible, or (most typically) some combination of these extremes. See our PLoS ONE paper for more details on how the %MinMax algorithm works. %MinMax results are ave...
Tags: %MinMax, tool, calculating, synonymous, codon, usage, impact, protein, folding
2164 days ago
