Results for "Python"
Users
Skills: Python2915 days ago
- Skills: Python
3064 days ago
- +27 more Users
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
...ava API to biological data and applications (default version)libbiojava3-java - Java API to biological data and applications (default version)python-biopython-sql - Biopython support for t...3940 days ago
List of bioinformatics workflow management tools !
...| web ] Ruffus – Computation Pipeline library for python widely used in science and bi...nbsp;web ] Snakemake – A workflow management system in Python that aims to reduce the compl...1132 days ago
- +12 more Blogs
Bookmarks
- A quickstart tutorial that allows to become familiar with the Python language. The exercises expect knowledg...ramming. A group of 2nd year computer science students with no previous Python knowledge required 60'-90' to...
3898 days ago
- ...ction, etc. More on this: http://bioinformatics.ca/workshops/2013/flow-cytometry-data-analysis-using-r-2013 http://pyvideo.org/video/1234/fcm-a-python-library-for-flow-cytometry
3882 days ago
- +65 more Bookmarks
Discussion topics
Selecting between Python 2 and Python 3?
Which version is best for bioinformatician to work on?3941 days ago
- Why bioinformatician still using Perl when Python is easy to code, good in ReXp and faster than perl?
3941 days ago
Pages
- ...ented, imperative and reflective. It also has a dynamic typesystem and automatic memory management; it is therefore similar in varying respects to Python, Perl, Lisp, Dylan, Pike, and...
3937 days ago
Linux Sort Commands for Bioinformatics
Almost all the scripting languages such as Perl, Python etc have built-in sort, but unfortunately none of them are as flexible as sort command. But one when it come to space efficienc...3616 days ago
- +5 more Pages
Top-level pages
List of bioinformatics open source projects/software.
...services BioPerl http://www.bioperl.org/wiki/Main_Page Perl language toolkit BioPHP http://www.biophp.org/ PHP language toolkit Biopython http://biopython.org/wiki/Main_Page Python la...3746 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...nditions http://www.unil.ch/dee/page36926_fr.htmlEggLib EggLib is a C++/Python library and program package f...nd Phenotype Data in Pedigrees http://watson.hgen.pitt.edu/FFPopSim C++/Python library for population geneti...3727 days ago
- +16 more Top-level pages
Wire posts
News
- ...ople with a little bit of programming experience who want to learn Python. The google python class includes written materi...Python coding. These materials are used within Google to introduce Python to people who have just a lit...
3941 days ago
- pybedtools is a Python wrapper for Aaron Quinlan's BEDtools programs (h...y offering feature-level manipulations from with Python. See full online documentatio..., including installation instructions, at http://pythonhosted.org/pybedtools/. More...
3536 days ago
- +1 more News
Opportunity posts
Structural polymorphism analysis from NGS data
...eu, AMAIZING http://www.amaizing.fr/). The position requires a doctoral degree (PhD) in bioinformatics with strong expertise in script writing (Python/Perl) and pipeline developmen...3938 days ago
- ...prerequisite for this position. Experience with high throughput sequencing analysis methods, machine learning, protein interaction databases, perl/python scripting or BioconductoR are...
3938 days ago
- +78 more Opportunity posts
Fun
Golden Rules of Bioinformatics
...eature in programming languages. Good biological programmer goes on summer holiday with raincoat. [because see 1] Thanks god Google know python is not a python and multiplication and divisi...3906 days ago
Bio-Scripts
- (JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1207 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has more (1200?), but they require you to sign up import reques...1126 days ago
- +34 more Bio-Scripts
Groups
Python is a programming language that lets y...egrate your systems more effectively. Python is an easy to learn, powerful...roach to object-oriented programming. Python’s elegant syntax and dynamic...n many areas on most platforms. This Python group aim to provide a social...3935 days ago
Tags
- A quickstart tutorial that allows to become familiar with the Python language. The exercises expect knowledge of basic concepts of programming. A group of 2nd year computer science students with no previous Python knowledge required 60'-90' to complete the exercises. With about 3 hours time, the ...
Tags: Python, Bioinformatics, Tutorial
3898 days ago
COSMOS, our workflow management system for NGS data
COSMOS, our Python-based management system for implementing large-scale parallel workflows focusing on, but not restricted to, large-scale short-read "NGS" sequencing data is open-access published via Advance Access in Bioinformatics (Gafni et al. 2014). It is also available for download fo...Tags: Bioinformatics, Computational Biology, NGS, COSMOS, Python, Workflow
3564 days ago
- +22 more Tags
Comments
- ...Bio. PIRS allows users to customize different sequencing parameters, such as error rates, read lengths, and insert sizes. SimSeq: SimSeq is a Python-based short read simulator th...
405 days ago
Comment on "Tools for Sequence translation !"
...tic codes and can also perform reverse translation (i.e., convert a protein sequence into its corresponding nucleotide sequence). BioPython: This is a Python library that provides several...411 days ago
- +38 more Comments
