Results for "Python3"
Bio-Scripts
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has more (1200?), but they require you to sign up import request...1120 days ago
Installing Porechop on Ubuntu !
...) ✗ cd Porechop ➜ Porechop git:(master) python3 setup.py install running ins...nstall_lib creating /home/urbe/anaconda3/lib/python3.6/site-packages/porechop cop.../porechop/misc.py -> /home/urbe/anaconda3/lib/python3.6/site-packages/porechop cop...2090 days ago
- ...satisfied: pysam in /home/urbe/anaconda3/lib/python3.6/site-packages (0.14.1) ➜...tisfied: networkx in /home/urbe/anaconda3/lib/python3.6/site-packages (2.1) Requir...sortedcontainers in /home/urbe/anaconda3/lib/python3.6/site-packages (from PyInter...
2082 days ago
Installing Platypus on Ubuntu !
...git:(master) sudo apt-get install python3-dev Reading package lists......packages will be installed: libpython3-dev libpython3.6 libpython3.6...untu bionic-updates/main amd64 libpython3.6 amd64 3.6.6-1~18.04 [1.420...d.) Preparing to unpack .../0-libpython3.6_3.6.6-1~18.04_amd64.deb ......2003 days ago
Bash commandline to install Anaconda !
...no change /data/sata_data/workshop/wsu29/anaconda3/shell/condabin/conda-hook.ps1 no change /data/sata_data/workshop/wsu29/anaconda3/lib/python3.7/site-packages/xonsh/conda.x...1539 days ago
Bash command to install Miniconda !
...o change /data/sata_data/workshop/wsu29/miniconda3/shell/condabin/conda-hook.ps1 no change /data/sata_data/workshop/wsu29/miniconda3/lib/python3.7/site-packages/xontrib/conda...1539 days ago
- ...it@jit-HP-Pro-3335-MT:~$ sudo apt-get install python3-smbc Reading package lists.....following NEW packages will be installed: python3-smbc 0 upgraded, 1 newly ins...mbc_1.0.15.6-1build2_amd64.deb ... Unpacking python3-smbc (1.0.15.6-1build2) ......
1523 days ago
Commands to install conda in Ubuntu !
...e/jit/anaconda3/shell/condabin/Conda.psm1 no change /home/jit/anaconda3/shell/condabin/conda-hook.ps1 no change /home/jit/anaconda3/lib/python3.7/site-packages/xonsh/conda.x...1495 days ago
- ...py>=1.16 in /home/urbe/.local/lib/python3.6/site-packages (from wgd==1....ipy>=1.2 in /home/urbe/.local/lib/python3.6/site-packages (from wgd==1....x>=1.5.2 in /home/urbe/.local/lib/python3.6/site-packages (from bokeh==...z>=2011k in /home/urbe/.local/lib/python3.6/site-packages (from pandas=...
1191 days ago
Set up WGD environment using conda !
...ent_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists. =1.16 in /home/urbe/anaconda3/envs/wgd/lib/python3.7/site-packages (from wgd==1....1187 days ago
