Results for "Quality"
Blogs
The DNA of a Successful Bioinformatician decoded !!!
...l research leader. They always said: "Well, you need some caring people!" I think there is a lot truth in that statement. If we do not care about quality, timelines, good team culture...3696 days ago
How to Prepare your Bioinformatics CV ?
...and layout Always ensure that your CV is laser-printed on white, good quality paper, use a clean typeface a...ladder. For students, it should generally be no more than three pages. Quality of print - The CV should be p...3363 days ago
- +18 more Blogs
Bookmarks
- ...embly of a microbial genome. Small RNAs Basic Galaxy Tutorial Quality control for small RNA This...l steps of the workflow for analysis of short RNA expression such as a quality control of the raw reads, pro...
3642 days ago
Ten recommendations for creating usable bioinformatics command line software
Bioinformatics software varies greatly in quality. In terms of usability, the command line interface is the...ility of their products, waste less user’s time, and improve the quality of scientific analyses.3608 days ago
- +120 more Bookmarks
Files
Bioinformatics approach to Boar Taint
...a traditional solution to remove boar taint but it also results in bad quality of meat due to low level of s...nal list of SNPs was prepared after filtering SNPs on the basis of SNP quality, coverage of SNP allele, func...3779 days ago
- The Leiden University Medical Center is a modern university medical centre for research, instruction and patient care with a high quality profile and a strong scientific orientation....
3817 days ago
Pages
Genome Assembly Tools and Software - PART2 !!
...sequence reads and a file of quality-value as the input. Since the quality-value file for the high throu...s similar to Velvet or Ray in quality. LACHESIS – Genome Ass...its potential to perform high-quality de-novo assembly of large gen...2675 days ago
Awesome perl frameworks, libraries and software - PART 3
...ror of Floodgap's TTYtter: an interactive console text-based command-line Twitter client and Perl platform (whew!) worldmind/perl-test-code-quality-template - Some tests fo...2484 days ago
- +2 more Pages
Top-level pages
- ...ds to a more standardized representation of structural data, e.g., by agreeing on a common atom name nomenclature. The knowledge of the structure quality is a prerequisite for further...
3937 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...754-60, 2009. PubMedCentral Improving SNP discovery by base alignment quality. Li H, Bioinformatics 27(8):1...lan and Hall, Bioinformatics 26:841-842, 2010. Publisher Website Data quality assessment, filtering, and co...3769 days ago
- +20 more Top-level pages
Wire posts
News
- ...ictions which are based on the analysis of the phylogenetic trees. The automated pipeline used to reconstruct trees aims at providing a high-quality phylogenetic analysis of...
3908 days ago
Illumina reveals first dataset of long reads
...Reads. Average read length is around 8,500 base pairs in release dataset. Best thing about this, there is not much effect on cost and quality of data. You can also check...3898 days ago
- +12 more News
Opportunity posts
- ...ures for continuous-context-sensitive Systems” offers the positions of 6 PhD Students (E 13 TV-L) for applicants interested in performing high-quality research on the connection be...
3937 days ago
4 positions in high throughput computational metagenomics and systems biology of natural products
...he Fondazione Edmund Mach (CRI-FEM) is a major international research institution with strong and expanding research interests in Fruit Genomics, Quality Health and Nutrition of Agric...3900 days ago
- +29 more Opportunity posts
ResearchLabs posts
National Center for Bioinformatics (NCB)
NCB is offering M.Phil and Ph.D programs in the area of Bioinformatics. The major goal of NCB is to promote quality training and research in the area of Bioinformatics. Bioinformatics...3563 days ago
- Using these high quality genomes we explore the evolutionary history of genes and species, building phylogenetic trees of life the contrasting roles of horizontal gene trans...
1252 days ago
Bio-Scripts
Estimate Genome Size with Jellyfish and R
...of the k-mer #-s -size=unit32 Hash size / memory allocation #-o -output=string Output file name #--min-quality-char Base quality value. Version 2.2.3 of Jelly...2235 days ago
- ...Formats sequence using base space (default for other than SOLiD). Quality -Q|--offset Offset to use for quality conversion,...
2116 days ago
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Tags
- Understanding Following table and graphs Duplication level kmer profile per base GC content per base N content per base quality per base sequence content per sequence GC content per sequence quality sequence length distribution More at http://www.bioinformatics.babraham.ac.uk/projec...
Tags: Bioinformatics, NGS, Assembly, Quality, FastQC, Tutorial
2932 days ago
- Assembly Likelihood Evaluation (ALE) framework that overcomes these limitations, systematically evaluating the accuracy of an assembly in a reference-independent manner using rigorous statistical methods. This framework is comprehensive, and integrates read quality, mate pair orientation and inse...
Tags: Bioinformatics, FASTQ, NGS, ALE, Framework, Stats, Reads, Evaluation, Quality, Assembly
2921 days ago
- +17 more Tags
Comments
Comment on "A quick guide to Phred scaling"
...used system for representing the quality scores of sequencing reads. I...uide to Phred scaling: Phred quality scores: Phred quality scores...ility of error of 1 in 1000. Quality score calculation: The Phred...or storing sequencing reads. Each quality score is represented as an AS...405 days ago
Comment on "Short-read assembly using Spades !"
...ps for short-read assembly using SPAdes: Quality control of raw reads: Before...tant to ensure that the raw reads are of high quality and do not contain sequencing...ning SPAdes, the next step is to evaluate the quality of the assembled genome. This...405 days ago
- +15 more Comments
