Results for "RNA-seq"

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  • RNA-Seq Data Pathway and Gene-set Analysis Workflows

    It describe the GAGE (Luo et al., 2009) /Pahview (Luo and Brouwer, 2013) workflows on RNA-Seq data pathway analysis and gene-set analysis. The gage package (2.12.0) now includes a new tutorial, “RNA-Seq Data Pathway and Gene-set Analysis Workflows“. First cover a full workf...

    Tags: R, Bioconductor, RNA-seq, GAGE, Pathway

    1384 days ago

  • Surrogate Variable Analysis (SVA)

    The sva package contains functions for removing batch effects and other unwanted variation in high-throughput experiment. Specifically, the sva package contains functions for the identifying and building surrogate variables for high-dimensional data sets. Surrogate variables are covariates constr...

    Tags: RNA-seq, Genomics, R, Bioconductor

    1026 days ago

  • Webinar on 'An integrated RNA and DNA approach to unravel genetic regulation in cancer'

    Webinar on 'An integrated RNA and DNA approach to unravel genetic regulation in cancer' Abstract Whole exome DNA sequencing (WES) or whole genome DNA sequencing (WGS) allows detection of mutations and polymorphisms in all exonic and genomic regions, respectively, while messenger RNA sequencin...

    Tags: NGS, data analysis, genomics, transcriptomics, DNA-seq, RNA-seq

    922 days ago

  • GenXPro GmbH

    GenXPro GMbH is service provider for entire spectrum of nucleotide-based information of any biological sample. By combining intelligent data reduction techniques and latest next generation sequencing technologies, our service portfolio provides most accurate and cost efficient solu...

    Tags: Sequencing, DNA-Seq, RNA-Seq, MACE, Epigenetics, microRNA, Chip-Seq, RAD-Seq, Methylation-Seq, transcriptomics, GBS, Gene expression, de-novo assembly, breeding, Exome Seq, Rare variants

    1187 days ago

  • deepTools

    deepTools addresses the challenge of handling the large amounts of data that are now routinely generated from DNA sequencing centers. To do so, deepTools contains useful modules to process the mapped reads data to create coverage files in standard bedGraph and bigWig file formats. By doing so, de...

    Tags: Bioinformatics, Computational Biology, NGS, deepTools, Genome, RNA-Seq, Visualization, Tools

    1017 days ago

  • GeneSpring webinar- Uncovering mechanisms of hepatotoxicity on 14 June at 8AM PST

    Uncovering Mechanisms of Hepatotoxicity for High Affinity Antisense Oligonucleotides – 3’ end RNA-seq Profiling Using GeneSpring GX High affinity antisense oligonucleotides (ASOs) containing bicylic modifications (BNA) such as locked nucleic acid (LNA) or constrained ethyl (cEt) desi...

    Tags: genesoring, agilent, hepatotoxicity, rna-seq, strand life sciences

    90 days ago