Results for "Reads"

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  • Ravindra Raut

    About me: ...er fungal pathogen challenges and genome duplication. Experienced in using next-generation sequencing technologies like shotgun sequencing, linked reads, and long-read sequencing for...

    1102 days ago

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  • Bioinformatics approach to Boar Taint

    ...ong to Norwegian Landrace (NL) and Duroc (D) pigs with varied boar taint levels were done in Illumina HiSeq2000 to >10X average coverage. Short reads generated from these samples...

    3751 days ago

  • Download blasr 1.3 version

    ...r I'm running "OPERA-LG_v2.0.5/bin/preprocess_reads.pl" and have the following er...:18:35 2018] Finding the SA coordinates of the reads using BWA aln...[Thu Jun 14 1...arySam > FALCON-Unzip-Scaff.bamMapping long-reads using blasr.../home/urbe/Tool...

    2113 days ago

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  • Assemble short reads http://ged.msu.edu/angus/tutorials/short-read-assembly.html #Tutorial #ABySS #Bacteria #Reads #Assembly #Genomics #NGS

    3582 days ago

  • Live webinar on long reads! http://programs.pacificbiosciences.com/l/1652/2014-06-16/2w46dr #PacBio #LongReads #NGS #Omics #Seq

    3564 days ago

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  • shovill: Assemble bacterial isolate genomes from Illumina paired-end reads

    Shovill is a pipeline which uses SPAdes at its core, but alters the steps before and after the primary assembly step to get similar results in less time. Shovill also supports other assemblers like SKESA, Velvet and Megahit, so you can take advantage of the pre- and post-processing the Shovill pr...

    Tags: shovill, Assemble, bacterial, isolate, genomes, Illumina, paired-end, reads

    1181 days ago

  • Metagenomics

    Metagenomics

    Metagenomics is the study of genetic material from environmental samples to characterize and identify the millions of microbes from these samples. Example: Gut microbiome, soil sample, water, etc. More information: http://www.nature.com/nrmicro/focus/metagenomics/index.html http://www.ploscom...

    Tags: metagenomics, metatranscriptomics, genomics, reads, 16S rRNA, microbes, microbiology, ecogenomics, ecology, microbiome

    3665 days ago

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