Results for "Reads"




    ...S is a genomics application for scaffolding genome assemblies with long reads, such as those produced by Ox...d high-quality draft genome assemblies with any long sequences (eg. ONT reads, PacBio reads, another draft...

    385 days ago

  • LoRDEC: a hybrid error correction program for long, PacBio reads

    ...specially intended for PacBio reads. It uses a hybrid strategy, m...ning that it uses two sets of reads: the reference read set, whos.... Usually, errors in PacBio reads include many insertions and d...(DBG) representing the short reads, and seeks a corrective seque...

    229 days ago

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Top-level pages

Wire posts

  • Find a pattern in first 7 characters of reads. bioawk -c fastx 'substr($seq,0,7) == $TAG { print }' reads.fq.gz #Reads #NGS #Extract #Pattern

    147 days ago

  • #Filter out #reads with #size to discard reads containing many Ns. BBNorm ( )

    137 days ago

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  • Illumina reveals first dataset of long reads

    ...hnology , acquired by Illumina releases new service for long reads sequencing i.e.,  FastTrack Long Reads. Average read length is arou...You can also check following pages for publications on long reads and more: http://www.illumin...

    1554 days ago

  • deepTools amounts of data that are now routinely generated from DNA sequencing centers. To do so, deepTools contains useful modules to process the mapped reads data to create coverage files...

    1112 days ago

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Opportunity posts





  • Metagenomics


    Metagenomics is the study of genetic material from environmental samples to characterize and identify the millions of microbes from these samples. Example: Gut microbiome, soil sample, water, etc. More information: http://www.ploscom...

    Tags: metagenomics, metatranscriptomics, genomics, reads, 16S rRNA, microbes, microbiology, ecogenomics, ecology, microbiome

    1350 days ago

  • #Mapping #sequencing #reads to a #reference #genome with #Bowtie2: a step-by-step guide

    Tags: Mapping, sequencing, reads, reference, genome, Bowtie2

    621 days ago

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