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Results for "Reads"

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• • Rahul Agarwal@raag

  

  Bioinformatics approach to Boar Taint

  ...ong to Norwegian Landrace (NL) and Duroc (D) pigs with varied boar taint levels were done in Illumina HiSeq2000 to >10X average coverage. Short reads generated from these samples...

  3774 days ago

• • Jit@jit.aber

  

  Download blasr 1.3 version

  ...r I'm running "OPERA-LG_v2.0.5/bin/preprocess_reads.pl" and have the following er...:18:35 2018] Finding the SA coordinates of the reads using BWA aln...[Thu Jun 14 1...arySam > FALCON-Unzip-Scaff.bamMapping long-reads using blasr.../home/urbe/Tool...

  2136 days ago

• • BioStar@biostar

  

  Evaluation of genome assembly software based on long reads

  ..., Newbler , SGA Assembler, Smartdenovo, Abruijn, Ra, DBG2OLC, Spades and Cerulean. The first 8 software use only long reads, while the 3 last software can merge long and short reads

  1905 days ago

• • Abhimanyu Singh@abhimanyu

  

  Spades tutorial PDF

  ...uencing. With time, the functionality of SPAdes was extended to enable assembly of IonTorrent data, as well as hybrid assembly from short and long reads (PacBio and Oxford Nanopore)....

  809 days ago