Results for "Reads"

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    ...S is a genomics application for scaffolding genome assemblies with long reads, such as those produced by Ox...d high-quality draft genome assemblies with any long sequences (eg. ONT reads, PacBio reads, another draft...

    351 days ago

  • LoRDEC: a hybrid error correction program for long, PacBio reads

    ...specially intended for PacBio reads. It uses a hybrid strategy, m...ning that it uses two sets of reads: the reference read set, whos.... Usually, errors in PacBio reads include many insertions and d...(DBG) representing the short reads, and seeks a corrective seque...

    194 days ago

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  • Find a pattern in first 7 characters of reads. bioawk -c fastx 'substr($seq,0,7) == $TAG { print }' reads.fq.gz #Reads #NGS #Extract #Pattern

    113 days ago

  • #Filter out #reads with #size to discard reads containing many Ns. BBNorm ( https://sourceforge.net/projects/bbmap/ )

    102 days ago

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  • Illumina reveals first dataset of long reads

    ...hnology , acquired by Illumina releases new service for long reads sequencing i.e.,  FastTrack Long Reads. Average read length is arou...You can also check following pages for publications on long reads and more: http://www.illumin...

    1520 days ago

  • deepTools

    ...ge amounts of data that are now routinely generated from DNA sequencing centers. To do so, deepTools contains useful modules to process the mapped reads data to create coverage files...

    1077 days ago

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  • Metagenomics

    Metagenomics

    Metagenomics is the study of genetic material from environmental samples to characterize and identify the millions of microbes from these samples. Example: Gut microbiome, soil sample, water, etc. More information: http://www.nature.com/nrmicro/focus/metagenomics/index.html http://www.ploscom...

    Tags: metagenomics, metatranscriptomics, genomics, reads, 16S rRNA, microbes, microbiology, ecogenomics, ecology, microbiome

    1315 days ago

  • #Mapping #sequencing #reads to a #reference #genome with #Bowtie2: a step-by-step guide https://insidedna.me/tutorials/view/how-to-use-bowtie2-read-mapping

    Tags: Mapping, sequencing, reads, reference, genome, Bowtie2

    586 days ago

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