Results for "Reads"

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    ...S is a genomics application for scaffolding genome assemblies with long reads, such as those produced by Ox...d high-quality draft genome assemblies with any long sequences (eg. ONT reads, PacBio reads, another draft...

    236 days ago

  • LoRDEC: a hybrid error correction program for long, PacBio reads

    ...specially intended for PacBio reads. It uses a hybrid strategy, m...ning that it uses two sets of reads: the reference read set, whos.... Usually, errors in PacBio reads include many insertions and d...(DBG) representing the short reads, and seeks a corrective seque...

    79 days ago

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  • Genome Assembly Tools and Software - PART2 !!

    ...me information and paired-end reads. DISCOVAR 51750 – Geno...xpression levels from RNA-Seq reads. MaLTA – Transcriptome...ose contigs can be individual reads from a subset of the paired-r...ended for Illumina sequencing reads. Quake adopts the k-mer error...

    182 days ago

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  • Reads QC http://evomicsorg.wpengine.netdna-cdn.com/wp-content/uploads/2015/01/introQC.pdf #Quality #Reads #NGS

    323 days ago

  • Assemble short reads http://ged.msu.edu/angus/tutorials/short-read-assembly.html #Tutorial #ABySS #Bacteria #Reads #Assembly #Genomics #NGS

    1117 days ago

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  • Illumina reveals first dataset of long reads

    ...hnology , acquired by Illumina releases new service for long reads sequencing i.e.,  FastTrack Long Reads. Average read length is arou...You can also check following pages for publications on long reads and more: http://www.illumin...

    1405 days ago

  • deepTools

    ...ge amounts of data that are now routinely generated from DNA sequencing centers. To do so, deepTools contains useful modules to process the mapped reads data to create coverage files...

    962 days ago

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  • Metagenomics

    Metagenomics

    Metagenomics is the study of genetic material from environmental samples to characterize and identify the millions of microbes from these samples. Example: Gut microbiome, soil sample, water, etc. More information: http://www.nature.com/nrmicro/focus/metagenomics/index.html http://www.ploscom...

    Tags: metagenomics, metatranscriptomics, genomics, reads, 16S rRNA, microbes, microbiology, ecogenomics, ecology, microbiome

    1200 days ago

  • #Mapping #sequencing #reads to a #reference #genome with #Bowtie2: a step-by-step guide https://insidedna.me/tutorials/view/how-to-use-bowtie2-read-mapping

    Tags: Mapping, sequencing, reads, reference, genome, Bowtie2

    471 days ago

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